Daphnia magna (water flea): 116929259
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Entry
116929259 CDS
T07514
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04145
Phagosome
dmk04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116929259
09142 Cell motility
04814 Motor proteins
116929259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116929259
03036 Chromosome and associated proteins [BR:
dmk03036
]
116929259
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
116929259
04147 Exosome [BR:
dmk04147
]
116929259
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116929259
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
116929259
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
116929259
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116929259
Exosomal proteins of other body fluids (saliva and urine)
116929259
Exosomal proteins of colorectal cancer cells
116929259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
116929259
NCBI-ProteinID:
XP_032792328
UniProt:
A0A0P5YL21
LinkDB
All DBs
Position
LG8:1622704..1625128
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGRMPSDKVAGGIDDSFSTFFAECGSGK
HVPRAIFVDLEPTVVDEVRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQNSVGDITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGMDSVEGEGEGGDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcaatccacgttggacaagctggagttcagatcggaaacgcctgt
tgggaattgtactgcctggagcatggaattcagcctgatggtcgcatgccctcggacaag
gttgcgggtggaatcgatgattccttcagcacttttttcgctgagtgtggttcgggaaag
cacgtcccaagagctatattcgtcgacttggaaccaaccgttgtagatgaagttcgtact
ggcacgtaccgctccctgtttcaccctgagcagctcatcaccggaaaggaggacgctgct
aacaactacgcacgtggccactacaccatcggcaaggaaatcgtcgatattgtattagat
cgtgtccgaaagctgtccgatcaatgcactgggcttcagggctttctcattttccattcc
tttggtggaggcactggctcgggttttgcctcattgctgatggaacgtctctcagttgat
tacggcaaaaaatccaaattggagtttgctatctaccctgctccacaggtgtccacagcc
gttgtcgagccgtacaattcaattttgaccacccatactactttggaacattccgattgc
gctttcatggtcgataacgaagctatctatgacatttgtcgtcgcaatctagacatcgag
cgtcctagctacaccaatttgaatcgtctgattggtcaaatcgtctcttccattacagct
tctcttcgtttcgatggcgcattgaacgttgatttgaccgaattccagacgaacttggtc
ccttaccctcgtatccatttcccattggtaacttatgccccagttatttccgccgagaaa
gcttaccatgagcagaattctgttggcgatattaccaatgcttgctttgagcctgctaat
cagatggtgaaatgtgatcctcgccatggtaaatacatggcttgttgcatgttgtatcgc
ggtgacgtggttcccaaagatgtcaatgctgctattgccaccattaaaaccaagcgttct
atccagttcgttgattggtgccctactggttttaaggttggtatcaactaccagccacca
actgttgtccctggcggtgatctcgccaaggtgtcccgtgctgtttgcatgttgtccaac
actactgctatcgctgaagcctgggctcgtttggatcacaagtttgacttgatgtatgct
aaacgtgcttttgttcactggtacgttggagagggcatggaggaaggagagttctccgaa
gcccgtgaagatctcgctgctctagagaaggattacgaagaggttggtatggattccgtc
gagggagagggagaaggcggtgatgaatattaa
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