Daphnia magna (water flea): 116929305
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Entry
116929305 CDS
T07514
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00061
Fatty acid biosynthesis
dmk00071
Fatty acid degradation
dmk01100
Metabolic pathways
dmk01212
Fatty acid metabolism
dmk04146
Peroxisome
Module
dmk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116929305
00071 Fatty acid degradation
116929305
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116929305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmk01004
]
116929305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116929305
Enzymes [BR:
dmk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116929305
Lipid biosynthesis proteins [BR:
dmk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116929305
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of breast milk
116929305
Exosomal proteins of breast cancer cells
116929305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
116929305
NCBI-ProteinID:
XP_032792380
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Position
LG8:1429908..1437831
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AA seq
706 aa
AA seq
DB search
MLLAAASTVAAGPAVVLKKIKGPDVEQYLHYVSGAAGMLAMAGVGVAAASAYYLANRPIP
TQPPFDLDNQTIVEGPELIHYSRFAKDGKEMKFMRYLYEDTRTLYDVFRRGARVSNNGPC
LGWREDPTKQYQWMRYEETLLRAQNLGSGLVALGLKPTPDTLVGVYGQNSPEWVLSEYAL
YSYSMVIVPLYDTLGPEACNYIINQAEMSLVICDNEDKCKSLLNNSPSCLKQLVHIKPIS
KETTELAKRKGINMLSFEYVEKLGAEKKNRPVPPQPEDLCTICYTSGTTGNPKGVMLTHE
NVVADVSATLLQLGDQKPNCSDVMMSFLPLAHMLERICQIAVYMQGGAIGFFGGDIRNLM
DDMKALRPTITPAVPRLLNRIFDKVQSGLNSSSLKRFLFNAALSSKENELRRGIIRNNTI
WDKLVLGKVQDSMGGRIRLLVVGSAPLAGSVLTFMRCALGCVIVEGYGQTECVAPTTLTV
QGDSTPEHVGPPIPCCAIKLVDVPDMNYYAASGHGEICIKGTNVFKGYFKEPEKTKEALD
EDGWLHTGDIGTFLPNGTLKICDRKKNIFKLSQGEYIAPEKIENIYIKSQYVAQVFVHGE
SLKSCTVAVIVPDVENVKFYAEEQGIPGTLSVLCNHPDIKQLILKDITDLGKKGGLKSFE
QVKDIYLHPDAFSVQNGLLTPTLKSKRPELRTYFKPQLEDMYMKLD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttactcgctgctgcttcaaccgttgccgctggcccagctgtcgttttgaagaaaatc
aaaggcccggacgtggaacaatatttgcattatgtcagcggtgcggcaggtatgctggca
atggcaggagtcggagtggccgctgcctcggcctattatttggccaaccggcccatccca
acacaacctcctttcgatctggacaatcagacaattgtcgagggaccagaactcattcac
tattcccgctttgctaaagatggcaaagaaatgaaatttatgcgctacctctatgaggac
acccggaccctctacgacgtcttccggcgaggagcgcgtgtttcaaacaacggaccttgt
ttggggtggcgagaggatccgaccaaacagtaccaatggatgcgctatgaagaaaccctg
ttgcgtgctcagaatttaggttcgggcctagtggctcttggcctgaagcccacacccgac
acactggtgggcgtctacggtcagaatagtcccgaatgggtactcagcgagtatgccctc
tacagctactccatggtcattgtgccgctttacgacacactgggacccgaagcatgcaac
tacattatcaaccaagccgaaatgtctctggttatctgcgataacgaagataagtgcaag
tctttgctcaacaattcaccctcctgtctaaagcagctggttcacataaaaccaatctcc
aaagagacaaccgagttagccaagcgtaaaggcatcaacatgttgagctttgagtatgtg
gagaagcttggcgcggaaaagaaaaacaggcctgtgccgcctcaacctgaggacttgtgc
accatttgctacacgtccggaacgacgggcaaccccaagggtgttatgttgacccatgaa
aatgttgtggctgacgtcagtgcaacgcttctgcagttgggtgaccagaaacccaactgc
tcggacgtgatgatgtccttcctgcctttggcacacatgctggaacgcatttgccaaatt
gcagtgtacatgcagggaggcgccatcggtttctttggcggtgacatccgtaatttgatg
gatgatatgaaagcccttcgacctaccatcactccagccgtcccacgcctgctcaaccgc
attttcgacaaggttcagagcggcttgaacagctcgtcactcaagcgcttcctcttcaac
gcagcactcagctccaaggagaacgaactgcgacgtggtattatccggaataacactatc
tgggataaacttgtattgggaaaagttcaagacagtatgggtggacgcatccgactttta
gtcgttggctcggctcctttggctggatccgttttgactttcatgcgttgcgccttgggc
tgcgtcattgttgaaggctacggtcaaaccgaatgcgttgcgccaacaaccctcaccgtc
cagggagattccacaccagaacacgtcggtcccccaatcccgtgctgcgccatcaagtta
gtcgacgtacccgatatgaactactatgcagccagtggccacggtgaaatctgcatcaaa
ggtactaacgtcttcaaaggctacttcaaagaacctgaaaagaccaaagaagctttggac
gaggatggttggcttcataccggtgatatcggcaccttcttacccaacggaacgttaaag
atttgtgatcgcaagaagaacatcttcaaactctcacagggtgaatatatcgcacccgag
aaaattgaaaacatttatatcaaaagccagtacgtcgcacaagtcttcgttcacggcgaa
agtctaaagtcgtgcacagttgcggtcatcgtacctgatgtagagaacgtcaagttctac
gcagaagaacagggtattcctggaacactctctgtgctgtgcaaccaccctgatatcaag
cagcttatattgaaagacatcacagatctggggaaaaaaggcggtcttaaatccttcgaa
caggtcaaagatatctatctacacccagatgccttctcagtacagaatggtttactgacg
ccgacactcaaatcgaagcgtcccgaactccgtacttacttcaaacctcaactcgaggat
atgtatatgaaattggactaa
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