Daphnia magna (water flea): 116929306
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Entry
116929306 CDS
T07514
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00061
Fatty acid biosynthesis
dmk00071
Fatty acid degradation
dmk01100
Metabolic pathways
dmk01212
Fatty acid metabolism
dmk04146
Peroxisome
Module
dmk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116929306
00071 Fatty acid degradation
116929306
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116929306
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmk01004
]
116929306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116929306
Enzymes [BR:
dmk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116929306
Lipid biosynthesis proteins [BR:
dmk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116929306
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of breast milk
116929306
Exosomal proteins of breast cancer cells
116929306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
116929306
NCBI-ProteinID:
XP_032792383
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Position
LG8:1452425..1456566
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AA seq
696 aa
AA seq
DB search
MFSAGTDEFVHDQDDEQYYDFISGAAGMLAIAGIGVAAASAYYLSKKPAPTQPPFNLDNQ
TMVEGPDLIHYSRFSPHGNEMKFMRYLYDDTRTLYDVMPRGSRISNNGPCLGWRADPSSK
YQWISYQETMLRAQNFGSGLVALGLKPGPDTLVGVYSQNNPEWVLSEYALYTYSMVVVPL
YDTLGPDACQFIINQAEMPLVICENDEKCRSLLKDTPACLKHLVHIKPLSNETIELAKRN
GINTLSFHEVETLGNEYKFKPVPPRPEDLSIICYTSGTTGHPKGVMLTHENVIADASAIL
LHMGDTKPNSSDVMISFLPLAHMLERISHLVLYIGGGAIGFFGGDIRNLMDDMQALKPTI
TPAVPRLFNRIYDKVQSGLSNSKVKRLLFNAALGSKERDLRRGIIQKNTIWDKLIFKKVQ
DGMGGRIRLIVVGSAPLAGAVMNFMRCALGCVIVESYGLTECAAPTTLTVNGDYTPEHVG
TPIPCCAIKLIDVPDMNYYAASGRGEICIKGTNVFKGYFKDPEKTNETLDKDGWLHTGDI
GTFLDNGTLKIIDRRKHIFKMSQGEYIAPEKIESIYIKSQYVAQVFVHGESLKSCTVGVI
VPEEESVRHYANQHGISGSLSFLCNIPEIKQLILNEITDFGKKGGLKSFEQVKDIYLHPD
LFTVENGLLTPVLKSKRPELRTFFRAQLVDMYRKFD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgctggcacagacgaatttgttcatgatcaagatgatgaacaatactatgat
tttattagcggtgcggcaggcatgttggccattgcagggattggagttgccgccgcttcg
gcttattacttgtccaagaaacctgctccaacacaaccgcctttcaatttagacaatcaa
acgatggtcgagggcccagacttgatccactactccagattttcaccacatggcaatgaa
atgaaattcatgcgctatctgtacgacgacacccggactctctacgacgtaatgcctcgt
ggatcacgcatttcaaataatggtccttgtttgggttggagagctgatccctcgtcgaag
tatcaatggataagttatcaagaaactatgttgcgtgcacagaattttggttccggtcta
gtggcccttggcttgaagcctggtcccgataccctagtcggcgtctatagccaaaacaat
cccgaatgggtattaagtgaatatgcgctctatacctactccatggtcgtcgtgccgctt
tatgacactctgggacctgatgcttgtcagttcattatcaatcaagccgaaatgccactc
gttatttgtgagaacgacgaaaagtgcaggtcgttactgaaagacacacctgcctgtctc
aaacatttggttcacatcaaaccactttctaacgaaacaattgaattggccaaacgaaat
ggtatcaacacattgagtttccacgaagtcgaaacgttaggcaatgaatataaattcaaa
ccagtgccacctagacccgaggatttgtccatcatttgctacacctctggaacaactggc
caccctaagggagtaatgctcactcacgagaacgtgattgccgacgcgagtgccatatta
cttcatatgggagatacgaagcccaacagctcggatgtgatgatttccttccttccgttg
gcacacatgctggaacgcatatcccatttagtcctctatataggtggaggcgctattggt
ttctttggcggtgatattcgtaatttgatggatgacatgcaagctctaaaacccaccatc
acgccagccgttccacgattatttaaccgcatttacgacaaggtccaatctggtttgagc
aactcgaaagttaagcgtctgctttttaacgcggctctcggctccaaagagagagatcta
cgacgtggtatcatccagaagaacaccatctgggacaaacttatcttcaaaaaagttcaa
gatggaatgggaggacggatcaggttaattgtagtgggttcagctcctttggctggagct
gttatgaactttatgcgatgcgcgctagggtgtgtcattgttgaaagttacggacttacg
gaatgtgctgcccccacaactttaactgttaatggagattatactccagaacatgttggt
acaccgatcccttgctgcgctattaaattaattgatgtacccgacatgaattactacgct
gctagtggccgtggtgagatttgtatcaaaggcaccaatgtctttaaaggctattttaaa
gaccctgaaaagacgaacgagacactggacaaggatggctggttgcacactggagacatt
ggcacctttttagataacggaacgttgaaaatcattgatcgaaggaaacacatcttcaaa
atgtcgcaaggtgaatacattgccccggagaagattgagagtatttacatcaaaagccaa
tatgttgcgcaagttttcgtgcacggtgaaagcctcaagtcatgcacagtaggagtcatt
gtaccagaggaagaaagcgtcagacactatgcaaatcagcatggtatttctggtagcctt
tcgttcctctgcaacatacccgaaatcaagcagctaatcctgaatgaaatcactgatttt
gggaaaaaagggggactgaaatccttcgaacaggtgaaagatatctacttgcacccagat
ctctttacagtagagaatggtttgttaacgccggtactcaagtctaaacgcccggaactt
cgcacttttttccgagctcaacttgtggatatgtaccgtaaattcgactga
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