Daphnia magna (water flea): 116929308
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Entry
116929308 CDS
T07514
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00061
Fatty acid biosynthesis
dmk00071
Fatty acid degradation
dmk01100
Metabolic pathways
dmk01212
Fatty acid metabolism
dmk04146
Peroxisome
Module
dmk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116929308
00071 Fatty acid degradation
116929308
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116929308
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmk01004
]
116929308
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116929308
Enzymes [BR:
dmk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116929308
Lipid biosynthesis proteins [BR:
dmk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116929308
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of breast milk
116929308
Exosomal proteins of breast cancer cells
116929308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
116929308
NCBI-ProteinID:
XP_032792386
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Position
LG8:1447191..1451110
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AA seq
696 aa
AA seq
DB search
MFPTDSDLVYGASGDGQNFDYLTGTAGILAVAGIGVAVATAYNWIGKPNPAKIPFDLDNQ
TIIVGPDFIHYSHLSKEGGEIKLLRYLYEDTRTLYDVFRRGERVSNNGPCLGWRVDPTKP
YQWMSYKESLLRAQNFGSGLVALGLHPGPGTLVGIYSQNCPEWILGEYALYTYSMAIVPL
YDTLGPDSCRFIINQTEISVVICENDEKCKSLLNNPPACLKQLIHIKPISKETVELAKRL
NINTLSFELVEKFGVERKYNPVPPRPEDMCTICYTSGTTGNPKGVVLTHENVVANASGVL
LQLGDEKPNSSDVMISFLPLAHMLERISHVGVYMGGGAIGFYSGNIANFMDDMKALKPTI
TPAVPRLFNRIFDKVQSGLSNSALKRFLFKAALSSKENERRHGIVRNNTIWDKLVLSKVQ
DSMGGRIRLIIVGSAPLAGTVLNFMRCALGCVIVESYGLTECAAPTTLTVHGDYTTEHVG
TPLACCAIKLVDVPEMNYYAANGRGEICIKGTNVFKGYFKDPEKTREALDDDGWFHTGDI
GTFLDNGTLKIIDRKKNIFKLSQGEYIAPEKIESIYVKSQYVAQVFVYGESIKSCTVGVI
VPDVENVKRYADERGILGTHSVLCNMPEIKQLILNDITDLGKKAGLKSFEQVKDIYLHPE
AFSVQNGLLTPTLKSKRPELRNFFRPQLEYVYRKLN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccacagattcggatttagtttatggagcatcgggcgatggacaaaactttgac
tacctcactggtacggccggcattctagcagtggccggaatcggagtggccgtggcgaca
gcctacaattggatcggcaaacccaatccagcgaaaatacctttcgatttggataatcaa
acaattattgtgggacctgattttattcactactcgcatttgtccaaagaaggtggtgaa
ataaaattgctgcgctatctctacgaagacactcgtactctatatgatgtcttccggcgt
ggagagcgagtctcaaataatgggccttgcttgggatggagggtggatccaacaaaaccg
taccagtggatgagctacaaagagagcttattgcgtgctcagaattttggctcgggtcta
gttgctcttggcctccatccgggacccggcactctcgtagggatttatagtcaaaactgc
ccagaatggatcttaggcgaatatgctctttacacctactccatggctattgtgccactg
tacgacactcttggacccgattcctgtcgcttcataatcaaccaaactgagatctcggtg
gtcatctgtgaaaatgatgaaaaatgcaagtcgttgcttaacaatccgcctgcttgcctc
aagcaacttattcatattaaacccatttccaaagagactgtggaattggcgaaacgtcta
aacatcaatacgttaagcttcgagcttgtcgaaaagttcggcgtggagagaaaatataat
cctgtgcctccaagacccgaagatatgtgcaccatttgttacacatccggaacaaccggc
aacccaaagggagtcgtactgacccatgaaaatgtcgtagcgaatgcaagtggcgtactt
ttgcaactgggcgacgagaaacccaatagctcggatgtgatgatatccttccttcctttg
gcgcatatgctggaacgtatttcccatgtcggtgtctacatgggaggaggtgctatagga
ttctatagcggaaacatcgcaaattttatggatgacatgaaggctctgaaaccaacaatc
acgccagccgtcccgcgactatttaatcgcatcttcgacaaggttcaaagtggattgagc
aattcggctcttaaacgcttcctattcaaagcagcccttagttccaaggagaacgaacga
cgacatggtatcgttcggaataacactatctgggacaaacttgttttaagtaaagttcaa
gatagcatgggtgggcgaatcagattaatcattgtcggttcagcacctctggctggaact
gttttgaatttcatgcgctgtgccctgggctgcgtcatcgttgaaagctacgggcttacc
gaatgtgctgccccaacaactctcaccgttcacggcgattatactacagaacatgttgga
acgccgcttgcttgctgcgctattaaactcgttgacgtgccagaaatgaattactatgct
gcaaatggccgtggtgaaatttgtattaagggcaccaacgtcttcaaaggttatttcaag
gatcctgagaaaaccagggaggcattggatgacgacggctggtttcatactggcgacatt
ggcacctttttagataacggaacgttgaagatcatcgatcgtaaaaagaacatctttaaa
ctgtcgcaaggcgaatacattgcgcccgagaaaatcgagagtatttacgtcaaaagtcaa
tatgtcgcacaagtatttgtttacggtgaaagcattaagtcgtgcaccgtcggagttatc
gtacccgatgtggaaaatgtcaaacgctacgcagatgaacgcggaatactgggtactcat
tcagttctttgcaacatgcccgaaatcaagcagcttatattgaacgacatcactgacttg
gggaaaaaagccggtctcaaatcctttgaacaggtcaaagacatctatctacacccagaa
gccttttcagtgcagaacggtctattgacgccgaccctaaaatcgaaacgcccggaactt
cgtaacttctttagacctcaacttgaatatgtttaccgcaagttgaactag
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