Daphnia magna (water flea): 116929352
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Entry
116929352 CDS
T07514
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04136
Autophagy - other
dmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116929352
04136 Autophagy - other
116929352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116929352
03029 Mitochondrial biogenesis [BR:
dmk03029
]
116929352
Membrane trafficking [BR:
dmk04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116929352
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116929352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
DUF7165
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
VID27
WD40_MABP1-WDR62_1st
BCAS3_WD40
Beta-prop_Vps41
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
DUF7099
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
116929352
NCBI-ProteinID:
XP_032792435
LinkDB
All DBs
Position
LG8:complement(1883351..1886130)
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AA seq
449 aa
AA seq
DB search
MSQIRQENDSNAGGVFVNFNQDCTSLAVGTKECYRLFSLSSVDRLDLIYESSSELDEDVC
LVERLFSSSLVAVVSLSSPRKLKVCHFKKGTEICNYSYSNTILAVKLNRARLVVCLEESL
YIHNIRDMKVLHTIRDTPPNPQGLCALSPNNDHCYLAYPGSSSIGEVQIFDAYNLQAKTM
IPAHDSPLAAIAFSSTGTLIATASEKGTVIRIFKVSDGARLHEFRRGVKRCATIYSLAFS
ADSNFLVASSNTETVHVFRLETTKDAQRPGSSSEEPQGWMGYLSKAVSVSASYLPTQVAD
VFSQGRAFATVHLPFQGIRNVCALATIQKVTRLLIASTDGYVYIYAINPTEGGDCTLLKQ
HRLDGSTDNGPENSQTSEVHSAGQGKVKLDSTGSYALIVRGRPFSQMTADVLGDSEKFHD
MERATETPPANPLRLDDDGEFPPMTQKLD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaatccgacaagaaaatgactccaatgcaggaggtgttttcgtcaattttaat
caagactgcacgtctcttgctgtgggaacaaaagagtgttatagattattttctctttct
tctgtggatcgtttagatctcatttatgaaagctctagtgagttagatgaagatgtttgt
cttgttgaaagactgttttctagcagtttggtggcagtagttagcttatcttctccaaga
aaattaaaggtttgccatttcaaaaaaggcacagagatctgcaattattcatattccaat
actattttagctgtgaaactcaacagagctagactggtagtgtgtttggaggagtctctg
tacatccacaacataagagatatgaaagtactacataccatccgtgacactcctccaaac
ccccaaggtttatgtgcattatctcccaacaatgaccattgctatctagcctatcctggc
tcctcaagtattggagaagtccaaatttttgatgcctacaatttgcaagctaaaaccatg
ataccagctcatgattcgccattggctgcaattgcctttagctcaacgggaactctaatt
gcgactgcctccgagaaagggactgttattcgaatcttcaaggtgtctgacggcgctcgc
ctacatgagtttcgacgaggagtaaaacgttgtgccacaatttacagcttggcattcagt
gctgattccaactttctggttgcatcatcaaatacagagacagttcatgtcttccgatta
gaaaccaccaaagatgcacaacgtcctggctcttccagtgaagagcctcaaggctggatg
ggctatctttctaaagcagtctcggtatcggcaagctatctgccaactcaggtggctgac
gttttcagtcaaggtagagctttcgccactgtacacctaccattccaaggcatccgaaat
gtttgtgcactcgcaacgatccagaaagtcacccgtttattgattgcttcaacggatggg
tacgtttacatttatgctatcaacccgaccgaaggaggtgactgcacgttgttgaagcaa
catagattggatggatcaactgacaatggccctgaaaattctcaaacgtcggaagttcac
agcgcaggccaaggcaaagtcaaattagattcgacaggtagctacgcgctcattgtcagg
ggacgcccattctctcagatgacagctgatgtcctaggagattctgaaaagttccacgat
atggagcgtgccacggagactcctccggcaaatcctcttcgcttggatgacgacggggaa
tttcctcctatgactcaaaaattggactga
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