Daphnia magna (water flea): 116929420
Help
Entry
116929420 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: AP-3 complex subunit delta-1
KO
K12396
AP-3 complex subunit delta
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116929420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116929420
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Others
AP-3 complex
116929420
Endosome - Golgi transport
116929420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
116929420
NCBI-ProteinID:
XP_032792534
LinkDB
All DBs
Position
LG8:9444089..9449943
Genome browser
AA seq
1215 aa
AA seq
DB search
MALTKLKGNLERILDKNLADLVRGIRNNKENEVKYIAQCIEEIKAELKQENIAVKANAVA
KLSYLQMIGYDISWAGFNIIEVMSSNKFTFKRIGYLAASQSFHQDTEVLMLTTNMIRKDL
SSQSQYDAGVTLSGLACFINQDLARDLANDLMTLLSSTKPYIRKKAVLLMYKVFLSFPDA
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARKNPKNYLSLAPIFFKLMTSSTNNWMLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECINTVIAVLISISTGMPSHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILLCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMVHMDRAEGTQYRDELLSKIIEICSQDNYHFITSFEWYIS
VLVDLSRMEGLRQGHVVASQLMDVTIRVPAIRPFSVEQMALLLETSSGFAVRGITGQVAF
SSMCEVLYAAAWICGEFASHLKEPEAVLECVLKSKVTVLPGHIQAVFIHNLMKLYAHILR
KASTAEEKERARQTLCVLQERLTPFMQSADLEVQERASTAVHVLRVISKLQDVGEADAVN
ELMQLFQGELNPVAPKAQRKVPLPDGLDLDAWINEPEPESNDEPKADKGSLDIFYKTSTS
VSDFRDGYQGESVYEETEHMQSEDVRQSAARQQVRREALRVEQANNPHYLKASSQARQSP
SASSQLLSPASEEIPVMSINLSVPLQVSTSKKLSDKYLELERNKEASSDSKKHRSKRDKK
KKKKKDSSDEEETIQIVAPQVISTMELPEGARLSDSEDDGRPQTDPHRALNIDLDTPSYP
KEKPVVCASLEQAVSTPSTKIKKSKSKNGIEGSKEEKARRKKTKQEKEEKVAPSKGVNLN
DDLDFWLSASNGNESKEKKVATKAEMTVEETATSDPKKPAKNKKDKKEKKEKKSKKEKRE
KKDTQDRDEQNNHLSENMITPVTTAWKPLVDDKRLVMKYRVVAVPHDQHQVLVPVMLHNR
SSKTIHSMNFNVVDSANARLCRGQHEQDGVELPHQLASQSRVEIPFAFAVMDSTMVHQLR
GVLTYMTQGENGSVSEKLDFKLQIPCSXFLTSDPMSNDQFAELLASQELPGKAKILCEGI
ALTQALDRASRELNMRLVEMDSSGTSASLYSHHLSDHHLCILMKSQADGRLSIYGKSSNP
SLASSVIEEMRQMFA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaagttaaaaggaaacttggagaggatattagacaaaaatttggctgat
ttagtaagaggcatcagaaacaacaaggaaaatgaagtcaaatacatcgctcaatgcatt
gaagaaattaaggcagagctcaaacaagaaaacattgctgtcaaggctaatgcagtagca
aagctctcttatcttcaaatgattggctatgacatcagctgggctggctttaatataatt
gaggttatgagctcaaacaaatttactttcaaaaggattggatatttagctgcatcgcag
agcttccatcaagacactgaggtcctcatgttaacaacaaatatgatcagaaaggaccta
agtagccaaagtcaatatgatgcaggtgtaacattatctggattggcatgtttcattaat
caagatttagcaagagatcttgcaaatgatctgatgactttgttatcttcaactaagcct
tacataaggaaaaaagcggttttgcttatgtataaagttttcctatcgtttcccgatgcc
ttgcgacctgcattccccagacttaaagagaaactggaagatccggatcccggtgtacaa
tcggctgccgtcaacgtcatttgcgagttggccagaaagaaccccaagaactatcttagt
ttagcacctattttcttcaagctcatgacatcttctactaataattggatgctcatcaag
ataataaaattgtttggagctttaacacccttagaacctcgcctcggcaaaaagctgatt
gaacctttaactaatttgattcacagcacttctgcgatgtctctgctctacgaatgtatt
aatactgttatcgcagttcttatatctatatcgaccggcatgcctagtcacagtgcatct
attcaactgtgtgttcagaaattgcgtattttgattgaagattctgaccaaaatttgaaa
taccttggtctattggccatgtctaagatattgaaaacgcatcctaaatctgttcaggcg
cacaaggatttgattttgctttgccttgacgataaagacgaatcaatacgactacgtgct
ctagatcttctttacggaatggtgtccaagaaaaatctgatggagattgtgaaaaagcta
atggtacatatggatcgagcagaaggcacacaataccgcgatgaacttctttccaaaatc
atcgaaatttgctctcaagacaactatcatttcatcaccagtttcgaatggtacataagc
gtcttggtggacttgagtcgtatggaaggccttcgccagggtcatgtagtcgcgtcccaa
ttaatggacgtaaccatacgcgttccagccattcgtccattctctgtcgaacaaatggct
cttttattggaaacgtcgagtggctttgctgttcgcggaattacagggcaggtagccttc
tcttccatgtgtgaggtgctttatgctgccgcatggatttgtggagaatttgcatcgcat
cttaaagagcccgaagcagttttggaatgtgttttaaaaagcaaagtgactgtgttacct
ggtcacattcaggctgttttcatccacaatctaatgaaactctatgctcatattctacgc
aaagcatcaacggcagaagagaaagaaagagcgcgacagacgttgtgtgtactgcaagaa
cgactgactccgttcatgcaaagtgccgatctggaggttcaggaacgagccagtactgct
gttcacgtcctcagagtgatatccaagttgcaagatgttggtgaagcagacgccgttaat
gaactaatgcaacttttccaaggcgaattgaaccccgtggcacctaaagcacagcggaaa
gttcctttacccgatgggctggatttggatgcatggatcaatgagcccgagccagaatca
aatgatgaacccaaagctgacaagggatcccttgacatcttttacaagacgagcacatca
gtgtctgattttcgcgacggttatcagggcgaaagcgtttatgaggaaacggagcatatg
caatccgaagatgtccgccaatcggcggcccgtcagcaagtgcgccgtgaagctcttcgc
gtcgagcaggccaataacccgcattacctcaaggcttccagtcaagcgcgtcagtcgcct
tcagcgtcttcacaattactgtctccagctagcgaagaaatcccggtcatgtccatcaac
ttgtcagttccactccaagtctccactagtaaaaagctctctgacaaatacttggaactt
gaaagaaataaagaagcctcttccgacagcaagaaacatcgatctaagcgagacaagaaa
aagaagaaaaagaaggattcaagcgatgaggaagagaccattcaaatcgttgcaccacaa
gtgatatccaccatggaattgcccgaaggggctcgtttgtccgactcggaagacgatggc
cgaccacagacagacccccatcgcgctttaaacattgatttagacaccccgtcttatccg
aaagaaaaacctgtggtgtgcgcgagtttggagcaagcagtctccacaccatcgaccaag
ataaaaaaatccaagtctaaaaacgggatagaaggttcaaaggaagagaaagccaggaga
aagaaaacgaaacaggaaaaggaggagaaggtggcgccgagtaaaggcgttaacctcaat
gacgatcttgacttctggttgtctgctagtaacggcaacgagagtaaggaaaagaaagta
gcgactaaagctgaaatgactgtcgaagaaactgccacgagtgacccgaagaagccagca
aaaaataaaaaagataaaaaggaaaagaaagagaaaaagagcaaaaaagaaaaaagagaa
aagaaagatactcaagaccgcgatgagcagaacaaccatttgtcggaaaatatgattact
ccggtaacgaccgcgtggaaacccctagtagatgacaaacgtcttgtcatgaaatatcgt
gttgtagctgtaccccatgatcagcatcaagtactggtaccggtaatgctgcataatcgc
agcagcaaaacgattcattcgatgaacttcaatgtggtggactcggcgaacgcgcgtctt
tgtcgtggtcagcacgagcaagatggtgtcgaattgcctcatcagctggccagccaaagt
cgagtggaaataccgtttgcctttgctgtcatggacagcaccatggtgcaccagctccga
ggtgttctgacttacatgactcagggagagaacggatctgtctcggaaaagttggacttt
aagctacaaattccctgtagcngttttctcacttctgatcccatgagcaacgaccagttt
gccgaattattggcttctcaagagttgcccggcaaagccaagatattatgcgaagggatt
gctttaacccaggcgctcgatcgtgccagtagagagcttaatatgcgtttagtggaaatg
gacagttcgggaacatctgcctcgttgtatagccaccatttatctgaccatcatctttgc
attctcatgaaatcacaggccgatggtcgactgagcatctatgggaaaagcagcaatcca
tccttggcaagttctgttatagaagagatgcggcaaatgtttgcttaa
DBGET
integrated database retrieval system
