Daphnia magna (water flea): 116929452
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Entry
116929452 CDS
T07514
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116929452
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116929452
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Menin
YdaS_toxin
Ribosomal_60s
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
116929452
NCBI-ProteinID:
XP_032792597
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Position
LG8:complement(9554127..9559748)
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AA seq
461 aa
AA seq
DB search
MIIGPSAAGGMSDLVAHHHHMSGFAAHHHHHHMGLGGMMAAGMMPGMSSTSTGMTVQPTS
QSPTSSNNNNNNNNNNSSSIGGTSSSSLSSTGNGGLPSFGFTQEQVACVCEVLQQSGNIE
RLARFLWSLPACDQLHKNESVLKAKAVVAFHRANFKELYKLLETHPFSPHNHPKLQALWL
KAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYGHNPY
PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEHKDRVSGGSSAKDGGDGANDASALD
ESGSESLDGDGPDVVMATSSASARHSAALLDTPSPPPPHHIQHHHHHHHQQQQQQQQINN
MAAALANSLPHHNSQDSLIGGGGSIGDLYPDLKLASVYHATSHQLQMASAAAAAAAAAAA
AAAFGSPHHVTSHHHPHADLAHSLLQQPTSQSHDYNPHVSS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgattatcggtccgtcagctgctggaggcatgtccgacttggtggcacatcatcatcac
atgtccggatttgccgctcatcaccaccatcaccacatggggttaggtggcatgatggcc
gctggaatgatgccgggaatgtcttcgacatcgacgggaatgacagtgcaaccgaccagc
caatcgccaacctcgtccaacaacaacaacaacaacaacaacaacaattcgtcttccatc
ggtggcacttcttcttcttctttgagttcaaccggaaacggaggtctgccttcgttcggc
ttcacgcaggagcaggtggcctgcgtgtgcgaggtcctccagcaaagcggcaacatcgaa
cggctggcccgtttcctctggtcgctgccggcctgcgaccagctgcacaagaacgagagc
gtcctcaaagccaaggccgtcgtcgccttccatcgcgccaacttcaaagagctctacaaa
ctactggagacacacccgttttcgccgcacaatcatccgaaattacaggccctgtggctc
aaagcgcattacatcgaggcggagaagttgcgcggacgaccgctgggcgctgtgggaaag
taccgcgtgcgaagaaagttcccgctgccgcggacgatctgggacggcgaagagacgagc
tactgtttcaaagagaaatcgcgatcggtgctgcgcgattggtacggccacaatccgtac
ccgtcgccgcgcgagaagcgcgaactggccgaagccaccggtctcaccaccacccaggtc
tccaactggttcaaaaaccggcggcaaagagacagagctgccgagcacaaagacagagtt
tcgggaggaagttcggccaaggacggcggcgacggcgccaacgacgcgtcggccctggac
gaatcgggatccgagtcactggacggcgatggtcctgacgttgtcatggcgacgtcttcg
gcgtcggcgcgtcactcggccgcccttttagacacgccctcaccgccgccccctcatcac
atccaacatcaccaccaccaccaccatcagcagcaacaacagcaacaacaaattaacaac
atggctgccgctctggccaactccttgccccatcacaacagccaggactcgctgattggt
ggcggcggttcgatcggcgacttgtatcccgacctgaaattagcatccgtctatcacgcg
accagccaccagttgcaaatggcgtcggcggcggccgcggccgctgcagccgccgccgca
gccgccgccttcggatcgcctcatcacgtcacttcgcaccatcatccgcacgccgatttg
gctcactcgctgttgcagcagccgacgtctcaatcacacgactacaatccgcacgtcagt
tcgtga
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