KEGG   Daphnia magna (water flea): 116929585
Entry
116929585         CDS       T07514                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
dmk  Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116929585
   04121 Ubiquitin system [BR:dmk04121]
    116929585
Enzymes [BR:dmk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116929585
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116929585
Ubiquitin system [BR:dmk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116929585
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP Prok-RING_4 KH_2 KH_BICC1_1st KH_DEAH11_2nd RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 116929585
NCBI-ProteinID: XP_032792740
LinkDB
Position
LG8:897372..903299
AA seq 572 aa
MPASASYGESIELTRHNSLEDQRALQVAMELSLLSFGNNMEHHHMDHSTSPNPSLXNTMD
HINSLHYADEMRFLAKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVR
GEEPVFVVTGRKEDVAAAKREILSAAEHFSQIRASRRSGLVGQCGIVGTTGLVPPPPVPG
QVTIQVRVPYRVVGLVVGPKGATIKRIQQQTSTYIVTPSREKEPIFEVTGMPDNVEQAKR
EIEAHIALRTGLVNVDGSGNELSPDMMHDLAAGLNGLGLGMLGSNLGGAMDNGTSDLMGS
LYKSSSALRSAFTGHLNNDVYGVASTGLSNLLGDNAFGLRSQYGAPSASSAAGKIDSELQ
TLGSGLLNSLYDSDEGIGLGGSDSPTLSHSLIQPNIWSTDFGTGVVGGGSTSSINTNSTA
SGTSTTSAGGAKRSNSFGFPTSDSEHPPARRISSDPLTAIGSTLNSLSAAFQIRSDSDSG
VRDSSASASGSASPAACSPVGSSSNSSTRGSLKRECIMCCEGEMVAALVPCGHKLFCMDC
AQRLVPKESSDLAGGECPVCHQAVTQAIRIFS
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgccggccagtgcatcgtacggtgagtcgattgagttgacgcgccataattcgctggaa
gaccaacgagccctgcaagtggcgatggaattatccctgctcagtttcggcaacaacatg
gagcatcaccacatggatcactccacatcgcccaatccatcactanncaacaccatggat
cacattaattcgcttcattatgccgacgagatgagattcttggccaaaaagagtcaaaac
atgaccgagtgcgtaccagtcccgagctcagaacacgttgctgaaatcgtcggaagacaa
ggatgtaaaatcaaggcgttgagggccaaaaccaacacctacatcaagacgccagtgcgc
ggagaagagcctgtttttgttgttactggacgtaaagaagatgtcgctgctgccaaacga
gaaatcctgtcagcagctgaacacttttcacaaatcagagcttcaagacgatctggactt
gttggacaatgcggtatcgtcggtacaactggactcgttcctccaccaccagtccccggc
caagtcactatccaggttcgtgtaccgtatcgagttgttggattggtcgtcggccccaaa
ggagcaaccatcaagcgaattcaacagcaaaccagcacctacatagtcacaccgtccagg
gagaaggaacccatttttgaagtgacgggcatgccggataatgtcgaacaagctaaaaga
gagatagaggctcacattgctctacgcaccggtttggtgaatgtcgatggatccggcaat
gaactatcacccgatatgatgcacgatttagctgctggattgaacggactgggtttgggc
atgctcggatcgaatctaggaggcgcgatggataatggaacatctgatttgatggggtca
ctctacaagagttcgtctgctttacgatcagcttttactggacatctaaacaacgatgtt
tacggtgttgcatcgactggattgtccaacttgctcggagacaatgcattcggactacga
tcccagtatggcgccccatctgcctcttcggcagctggcaagatcgactctgaattgcag
acactgggcagtggattgctcaacagtttgtacgactcggatgaaggtatcggtttggga
ggatcggattcgcctactttgagccactcgctgattcagcccaacatctggtctacggat
ttcggtactggcgtggtaggcggtggcagcactagtagcatcaacacgaacagcacggcc
agcggcacaagcaccacatctgccggaggagccaaaaggagcaatagctttggatttccc
acatcggattctgaacacccacctgcccgtcgtatcagttctgatccactgacggccatc
ggatcaacgctcaactcattgtctgcagccttccagatccgttcggattcagattctggt
gtccgtgattcttccgcatcagcttccggttcggcttctccagctgcatgttcaccagtt
ggttccagcagcaattccagcacgagaggatcactcaagcgcgaatgcatcatgtgctgt
gaaggtgagatggtggctgctcttgttccatgtggtcacaagcttttctgtatggattgc
gcccaacgtttggtgcccaaagaatcatctgatttagccggaggagagtgcccagtctgc
catcaggccgtcactcaagccatcaggatcttctcgtaa

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