Daphnia magna (water flea): 116929688
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Entry
116929688 CDS
T07514
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116929688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116929688
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116929688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
116929688
NCBI-ProteinID:
XP_032792896
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Position
LG8:complement(8872503..8876022)
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AA seq
768 aa
AA seq
DB search
MIQHLFRNASKNSYDLLNVLHSIQESATCIAVRLDWTNRCLQVVNNGKGTVLTEIHQLCS
RLQSRNKVEEFLASNHLEEALYIAGQNCMSIDIESQPKCSSSSYKRCFQKGAWSNIECIG
NRSSSGTTISVYDFCWSEPEEETNANLFCSSLKKLIASFFLLHPYISFSLRYDSSKPPLL
QTKKEKNTILAAQQLFRLENCKGILPFCGLSCHFKIKGLLVPDLDKRYWFMFVNSRLVES
SEVFNFITSVLFDVSSNKGQQYSVVLNIKCSRAVYKSAISSKGERKVIFSHRNELLSLIH
SSLDKFISHAPLKKTALVVSWLATAYNEDLISSKSLLTIDDCNSNEPPQNKTNVITSRIS
SPLPCETNLLPLTQYYGKITNSVPFPFVSHAIEDFEMRIKQSPHLVQSFPSSSLLSPNHL
TQLWEEDEKMAEDRELHQIQQPCDKAANGFPFHAETKNSKIQEKSPKRLGLKRRQFSPDD
GSHCIPKRRFNIGQFWIQPKLPPNIAAANLNRLLATALQRQCKFTRDAMSNIRVINQVDK
KFICCVTQEEDKRYLVLVDQHAAHERICLERLLQIHSTKNDDGYVLVQSSPIQPHLSLSF
HSRDLEIIQKLSVEFTRYGLHMQISDSTVVVTRVPACFLAREINEVQRKRNSLYKDLVMA
LIEETISEYTKNGRLSTCVLPVQIRNVLNSLACHGAIKFGDELSLLQCTQLVRALGQCDV
PFQCAHGRPLLAPILELGELNALVPFEMTPNTVKPKYARLRDYNLRLS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgattcagcatctattcagaaatgcgtcgaagaactcgtacgacttgttgaatgttctg
cattcaattcaagaaagtgctacatgcattgctgtacgccttgattggacaaatcgatgc
ttacaggttgtcaacaatggaaaaggaactgtattgacagaaattcaccaattatgctca
aggcttcaatcaagaaacaaagtagaggaatttttagcaagtaatcatcttgaagaagct
ctctatattgctggtcaaaactgtatgtctattgacatagagagccaaccaaaatgttcc
agttcctcttacaaaaggtgtttccaaaaaggggcttggtctaacattgaatgtattgga
aataggtcatcgtcaggcacaacaatatctgtctatgacttttgttggtcagagccagaa
gaagaaacaaacgccaatcttttttgctcatcactaaagaaacttattgcaagtttcttt
ttgctacatccctacatatcattttcgctacggtatgattcttcaaagccaccccttctc
caaacaaaaaaagagaaaaacacaatacttgcggctcaacagctgttccgattagaaaac
tgtaaaggcatattacccttttgtggcctaagttgccatttcaaaattaaaggccttctt
gtaccggatttggataagcgctattggtttatgtttgttaacagtcggctggttgaatcc
agtgaagttttcaatttcatcacgtcggttttgtttgatgtgtcttcgaacaaaggacaa
cagtattctgttgtcctgaacattaagtgttcgcgtgcagtatacaaatctgcaatttca
tcgaagggtgaaagaaaagttatcttttcacacaggaatgagttattgtcattgattcac
agctcgctggataagtttatttctcacgctcccttgaaaaagacagccttagttgtgagt
tggctcgcaactgcatacaacgaggatttaatcagctcaaaaagtctcctcactatagat
gattgcaactcaaacgaaccaccgcaaaataaaacaaatgtgataacctcaagaatctca
tcacccttgccatgtgaaacaaatcttttaccactcacgcagtattatggcaaaatcacg
aattcagttccgtttccgttcgttagccatgcgatagaagattttgaaatgcggattaaa
caatctccacatttggtacaatcgtttccttcatcatctctgttgagcccaaaccacctg
acgcagttgtgggaagaagatgagaaaatggcagaagaccgtgagttgcaccaaatccag
caaccctgtgataaggcagccaatggcttcccattccatgcagaaacaaaaaacagcaaa
attcaagaaaagtctcctaaacgcttaggtctcaaaagaagacaattttctccagatgac
gggtctcattgtattcctaagagacggttcaacattggacagttttggattcaaccgaaa
ttaccacccaatatagccgccgcaaacctaaatagattactggcaacagcattgcaaagg
caatgcaaatttacaagagatgccatgagcaacattcgcgtaatcaatcaagttgataaa
aaatttatttgctgcgtaacacaagaggaagacaagcgttatctcgtacttgttgatcag
catgcggcccatgagcgaatctgcttggaaaggcttttgcaaattcattcgaccaagaat
gacgacggctatgttctggtccaatcttcaccaattcagccacatctctcgttgtctttt
cattcgcgagacctggagataattcaaaaattaagtgttgagtttactcgttacggtttg
catatgcagatcagtgattccactgtggtagtaacgcgtgttccagcttgttttttggca
agagaaatcaatgaggttcagagaaaacgaaattctttgtacaaggacttggtaatggca
ctgattgaagaaacaatttccgaatacacgaagaatggaagacttagcacctgcgtatta
ccagtacaaattcggaatgttttaaactctttggcatgccacggagcaatcaagtttggt
gatgagctttcgttgctgcaatgcactcaattggtgagagcgctaggccaatgtgacgtg
cccttccagtgtgctcatggacgacctctcctagcaccaatacttgagctcggggaactt
aatgcattggttcctttcgaaatgacgccaaacactgttaaaccaaagtatgcccgtttg
cgcgattataatttgaggttatcatag
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