KEGG   Daphnia magna (water flea): 116929725
Entry
116929725         CDS       T07514                                 
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116929725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116929725
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     116929725
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_ACSF4 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_NWD2_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_LRRK2 Cytochrom_D1 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_RIG_1st PHTB1_N Beta-prop_DCAF12 Nucleoporin_N Beta-prop_pof12 B-prop_COPA_B_2nd Rep_fac-A_C
Other DBs
NCBI-GeneID: 116929725
NCBI-ProteinID: XP_032792955
LinkDB
Position
LG8:complement(7080565..7082365)
AA seq 356 aa
MAKVDAVNEPIPSMTLILAFPASIVELSVISKFELGFRIFIYRCHIDTANEMYALVHKKE
AAHDEGIWSCSWTNKAEVGPEESDYVVTGGIDDAVKVWAWRNDQLELRHRLEGHALGVVS
VDTSFDGKLIATSSLDSFVRIWELQSGEKRQTIEAGPVDVWSVMFTPDSKYIISGSHAGK
INWFNVETGKLHQSYDTRGKFTLSIACSPDMKFVASGAMDGIINVFDIATGKLVHTLEGH
ALPVRSLCFSQNSQLLLTASDDGQIKIYDVQHAQLAGTVSGHGSWVLSVSVSPDNTRFVS
GSSDRTVKIWDMKAKQCLHTFTDHTDQVWSVCFNGDGEHIASVSDDRSINVYSCPL
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggccaaagtcgacgcagtgaacgaacccatcccctctatgactttgattttagctttc
ccggcctcaattgtggaattgagcgtgatctcgaaatttgagttgggttttcgtattttc
atctatcgttgtcacattgataccgctaatgaaatgtatgctttggtgcataagaaagag
gctgcacatgacgaaggaatttggagttgttcctggaccaataaagccgaagtaggtcca
gaagaatctgattatgtagttacaggtggaattgatgatgctgtaaaagtttgggcttgg
agaaatgatcagctagaactccggcatagactggagggccatgcattaggggtagtttct
gttgacacaagctttgatgggaaattaatagccacaagttccttggattcctttgttcgt
atttgggaactgcaaagtggagaaaaaaggcaaactatagaggctggtccagtggatgtt
tggagtgtaatgttcacacctgactcaaagtacattatctctggtagtcatgctggcaaa
atcaattggtttaatgtagaaactggcaaacttcatcagtcatatgatacacgtggaaaa
tttactttaagtatagcgtgtagtcctgatatgaagtttgttgcaagtggagcaatggat
ggcataataaatgtgtttgacatcgctactgggaaattagtgcacacgctggaaggacat
gcacttccagtgagatccttgtgcttctcccagaattctcagttgttattaacagcttca
gacgatggacagatcaagatttatgacgtgcaacacgcacaactagctggaacagtttct
ggtcatgggtcatgggtactcagtgtttcagtttctcctgataatacacgctttgtctcc
ggaagttccgatcgaacagtaaaaatttgggatatgaaggcgaagcaatgccttcataca
tttactgaccatactgatcaggtatggagtgtttgtttcaatggagatggggaacacatc
gcatcagtttctgatgacagatccatcaacgtatacagctgcccattatga

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