Daphnia magna (water flea): 116929844
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Entry
116929844 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00061
Fatty acid biosynthesis
dmk00071
Fatty acid degradation
dmk01100
Metabolic pathways
dmk01212
Fatty acid metabolism
dmk04146
Peroxisome
Module
dmk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116929844
00071 Fatty acid degradation
116929844
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116929844
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmk01004
]
116929844
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116929844
Enzymes [BR:
dmk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116929844
Lipid biosynthesis proteins [BR:
dmk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116929844
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of breast milk
116929844
Exosomal proteins of breast cancer cells
116929844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
116929844
NCBI-ProteinID:
XP_032793096
LinkDB
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Position
LG8:complement(11037887..11041231)
Genome browser
AA seq
719 aa
AA seq
DB search
MRSSWSWVSEAFVLLIRCIISSYTFITLPLYYVIQKPWKVKENYTKLRAKPLNQGEDDFI
VYKSVTTISDVHAKFIQDKVDTMEKVFCSAVSQHRNKPALGTRVILSEEDELQHDGKIFK
KFLLGGFQWRTYIQMNTEAENFGRGLRELGLKPFENVVIFAETRAEWLIAAIGCMKQNMP
IVTLYASLGDDALIHGINETDVSCIVTSQQLLEKFKNILPSTANVNLLIVMEDALKPLEL
DGYGSAVRVRSYQEVIRRGDEASKTGLLSGAFHLPKPGDTAIILYTSGSTGAPKGVIMSH
QNIVNAMLSYTDVGPLYKNDVYMAFLPLAHVLEFISESLWMLFGIPIGYSTPLTMTDESS
KIQRGCQGDASVLHPTIIACVPLVLDRIQKKIKEKIEGGPTFKKAIFNLAMEYKDEWIYH
GYNTPILNATLFKPIRAFLGGRIRFVLSGGAPLAPETHKFMKMTLCCPVLQGYGLTETCA
ATTLMDFDDNSWGTTGGPLTCCDIKLVSWVEGDYRIKDWPNPRGVIHIGGSNVAVWYFKX
PEKTLKAFYEENGRRWFRTGDIGEFTQEGFLKVIDRQNDLVKLQHGEYVSLGKVESELKI
NSLVDNICINADPTKMFPVALLVPNFDQLKNLAEKSGIELETIEDVSNHPRRQQMEKLVL
KELQKHAVKCRLQKFEVRQALTLLSDIWTPDTGLVTAAFKLKRKNIQDHYQFLINRMYS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagaagttcttggtcttgggtttctgaagcatttgtgctactcattcgatgtattatt
agcagctacactttcataacattgccattgtattatgtcatccagaaaccatggaaagtg
aaagaaaactacaccaaattaagggctaagcctttgaaccaaggagaagatgatttcatt
gtgtacaaaagtgtcactacgattagtgatgtacatgccaagttcatacaagataaagtt
gacacaatggaaaaagttttttgttcagctgtcagccaacataggaataaaccagcgttg
ggaacaagagtcatactatcagaagaggatgagttgcaacatgatggaaaaatctttaaa
aagttccttttgggtggttttcaatggcgcacctatatacaaatgaatactgaagcagaa
aactttggacggggattgagggagttgggtttgaaaccctttgagaatgttgtgatcttt
gcagaaacaagggctgaatggcttatagctgctattgggtgcatgaagcaaaatatgcca
attgttactctatatgcatctttgggtgatgatgcactaatccatggcatcaatgaaaca
gatgtatcatgcattgtcacttctcaacaactacttgagaagttcaaaaatatcctacca
agcaccgctaatgttaacttactgattgtgatggaagatgctctcaaacccttagaattg
gacggttacggaagtgcggtcagagtacgctcataccaggaagtgatccgccgtggtgat
gaagcaagcaaaacggggttgttgtcaggtgcttttcatttacctaagcctggagatacg
gctatcatattgtatacgagcggatctacaggtgccccaaagggagtcatcatgagtcac
cagaatatagtcaatgctatgctgagttataccgacgtaggtcctctgtacaaaaatgac
gtgtacatggcattcctcccactagctcatgtattggagttcatttcagaaagcttatgg
atgttgtttggaattccaatcggatattcgactcctctgacaatgacggatgagtctagc
aaaattcaacgtggctgtcaaggtgatgcatctgttctccaccctacaatcatcgcttgc
gtacctctcgttcttgatcgtattcaaaaaaagatcaaagagaaaattgaaggaggtcct
acttttaaaaaggcaatattcaacttggctatggagtacaaggatgaatggatttatcac
ggctataatactccaatacttaatgcgactctgtttaagcctattcgagcattcctcgga
ggtcgcattagatttgttttgtctggcggagctcctttggcacccgaaacgcacaaattt
atgaaaatgactctttgctgccctgtcttgcaagggtacggcctgacggaaacatgcgcc
gcaactacactcatggattttgatgacaactcatggggtacaaccggagggccactaaca
tgttgtgacatcaagctagtttcgtgggtggaaggagattacagaatcaaagattggccc
aatccacgtggagtgattcacattggtgggtcgaacgttgccgtttggtattttaaatag
cccgagaagacattaaaggctttttatgaagaaaacggaagacgttggttccgtactggt
gacattggcgaatttacacaagaaggatttctcaaagttattgatcgtcaaaatgatcta
gttaagctacagcatggtgaatatgtttccctgggtaaggtggaatccgaattgaagata
aactcattggtcgacaatatctgcattaatgcagacccaacaaagatgttccctgttgca
ttgttggtaccaaattttgatcaactgaagaacctagccgaaaaaagtggaattgaattg
gaaaccattgaagatgtaagcaatcatccacgaagacaacaaatggaaaagctggttctc
aaagaattacaaaagcacgcagtgaaatgtcggcttcaaaaatttgaagtacgacaagct
ctaacacttctttctgacatttggacaccggatacgggtcttgtgacggctgctttcaag
ttaaagcgaaaaaacattcaagaccattaccaatttctgatcaatcggatgtattcctag
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