Daphnia magna (water flea): 116929944
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Entry
116929944 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA7
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk02010
ABC transporters
dmk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116929944
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116929944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116929944
Transporters [BR:
dmk02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116929944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
116929944
NCBI-ProteinID:
XP_032793152
LinkDB
All DBs
Position
LG9:1548779..1559315
Genome browser
AA seq
2237 aa
AA seq
DB search
MYSFVIKLAIGKLLVPVFLSQGLFLTFVSALHLVGQFNMKMFWMQLKQLMWKNLLIRSRS
KLRVVTELVWPIILFVILALVRTKGLKDYKNECFLEERALPSAGSWQFLQSLICTFDNNC
HNVPPSTDRFSEEFNFQTVRNLVRDLTDVSKRRITNEEVVKGSGVAIDVAAGVAFAFKLL
SGGSSPKVNFPLKHVVNRDAFQRLVSLKNETSTSALYELMIRIPPPDVLKNYTENPQQVL
CNTTLLKSWISAQDESTLQTFSQVLCHSSAAEILSVVNGTLIINQIQQIVEDNLEQPLHL
EDWANLGRLLNTILLDIRDLNSLSTIFNEFNNTTLGKLSNQLWKSRDVETGNMTSTMAFF
NSTANILCGKNTLIREKKSPDFPDGPQSNQFRQRLFQSQSTNITRSGLTVPCTQLFINLQ
QNPLTRLILQLFYPFIRGKIIYTPRTPAFDSVIQLVNETFQDLRIVQRFADRWLTEISPS
IKRFLDQLDPEMIKNITGVITERFPVIANLTSSLTNTSDQIIRIRKTLVKLDLIANLIIT
YVECYEFDKFEGYDTEEEAVERGMDLIDIGGLWAVIVFKNQNVDLTTQNLPHNITYKLRM
DSSKIDSTKRLRDFFETPIPRTNPTRDMKYFTSGYIFLQDKIEQAIIKLQSNRTQLPGMY
MQQFPSPCYTYDTFFMAIAGLFPLFMILSFVYTCAMIVKSIVREKERRLKETMKTMGLGN
AVHWMAWFIDSMSFMLISCVLLSMILVFGRVLENSNFLLVFIFVLSFSIATVCFSFLVST
FFSRANLAAACGGFFFFACFLPYNFLNLNGQDYSLSTLVLSSLLSDVSFGIGCWYFASHE
QSGEGAQWSNIAVSPKDGDAYSLMGCILMMLFDAVLYLVLTWYIETVFPGQYGIPKPWYF
IFQPSYWCSEKRRNSTVGTVQAHAERDTELVEEESRDLMVGVSIRHLGKTYSNGKVALSN
LNLDFYEDQITSFLGHNGAGKTTTISILTGLFPPSVGTATINGLDIRYQMDDIRHQLGVC
PQHNVLFDQLTVEEHLRFYANLKTGEQIESRKEIDKMIDDLGLSHKRHDISEHLSGGMKR
KLSIGAAFIGNSKTVILDEPTAGVDPYSRRSIWDILLKYKEGRTIILTTHFMDEADLLGD
RIAIISQGQLKCCGSSLFLKQKLGSGYYLTVVKKDGQSASVDNAQATENPVSQNSTETDV
ERIVNVVKRHIQNGSVVENVGSDIVFCLPEFDDAGLRQRDKFPHLFDELDLNMEQLRVDS
YGVSDTTLEEIFLKVANDPSEENVTTPLETDQDEEVPQIEGNDTSDTFNLLSSEKLTGSV
LICQQFIALYVKRFCNSKRNLKGFFCEIVLPALLIIINQLTTMSLSAISPEPSIELSPWL
YGKSNVAFYANQNPNEVWPARYIKNMVNETGMGALCKNDNLTRLQCHSNITKLLNPLVNP
DDYQDFQCPCSMGIASCPVNLTAAELPRYKSVSTDDFIDVTGKDISLWIVRTYKKFKKFR
FGGFEFGLQNPFGNLNLTLFSQDIQDLLGALRFPLALQANASGEILNFENLAQLRGTFDK
VKVWYDNKAWASSVSYLNAINNVILRSSLPSSKNATFYSITAINHPMNYSFKQLEDRFTR
QVGISVLHAISVIFSMSFVPASFVIFLVEERKSKAKHLQFVSGVKPITFWVAAYTWDMIN
YLIPSILVILIFVGFDQQAYIGPKNIQGMILLLILYGFSAIPLMYPASLIFSVPSSAFVG
LACGNLFIGVITTISSFVLQLFDDVQLKLIGSILNEVYLIFPHYCLGRGMIDMAQVHFTT
QRLELLGFDYQRNIFEWDYLGRYFLSMIVQAILFFSFTVMLHYQVLPERVVRYFQTIQLP
PLHLEDEDVARERGRVERNDDSTDELRLNRLTKVYGRSKEPATNSLSFGLKKGECFGLLG
VNGAGKSTTFKMLTGDETVTSGNAFVGGHSILSDLREAQQSLGYCPQEDALLSLLTGTEH
LKLFAMLRGVPRKHMNKVVTDSLKKLGLLPYKNRCAGTYSGGNKRKLSTAIAFIGNPAVV
FLDEPSSGMDPKARRSLWSAIIDALKDSRSILLTSHSMEECQVLCTRLAIMVNGTLRCLG
SAQHLKNRFGNGYMISARCEVEHISDVLQHVQLAIPEARLRERRSRQLIWHIQPNVLSIS
SLFNKMEAARVTTNMLDYSITQTTLDDVFVRFARLQRETNEESDDFEQGFEDLPMHSRNV
AGLANQELYAVSVSSEM
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgtttgtcataaaacttgcaatcggcaagttgctagtaccggtgtttttgtcc
cagggactttttcttacttttgtttctgcacttcaccttgtggggcaattcaacatgaaa
atgttttggatgcagttgaaacagttgatgtggaaaaacttattgattagatccagatca
aagctcagagttgtgaccgaacttgtctggcctattattctgtttgttatattagccctt
gttaggaccaaaggtttaaaagactacaaaaatgaatgttttcttgaggaaagggcttta
ccttctgctggttcttggcaattcctacaaagtttaatttgtacttttgacaataattgc
cacaatgtcccgccatcgactgatcgttttagcgaagaatttaatttccaaaccgttaga
aatcttgttcgagacttgacagacgtttccaaaaggaggattactaatgaggaagtagtc
aaagggtctggagttgcaattgacgtcgccgctggtgtagcttttgctttcaagttactg
agtggtgggtctagccctaaagtaaatttccctctaaaacacgtcgtcaaccgggatgct
tttcagcgattagtaagcttaaaaaatgaaacgtcaacgtcggcactatacgagttaatg
attcgcattccaccaccggatgtattgaagaattataccgaaaatccacagcaagtgctt
tgtaacactacccttttgaaatcatggatcagtgcacaagacgagtcgactctgcaaact
tttagccaagttctgtgccattcttctgctgctgaaatattgagcgtagtcaacggaacc
ttaataatcaaccaaatccagcaaattgtggaagacaatttagagcaacctctacacttg
gaagactgggccaatcttgggcgtctactgaacaccatacttttagacattcgcgatttg
aattctctctccacgatattcaacgaatttaacaacacaacactaggaaagttatctaac
caactgtggaaatcgagggacgttgagacaggaaacatgacatcaactatggcgtttttt
aattcaaccgctaatattctgtgcggaaagaatactcttattcgagaaaaaaaatcgcca
gattttcccgatggaccccagtcaaatcaatttagacagagacttttccaatcccaaagt
actaatataactcgatcgggtcttacggtaccgtgcacgcagctttttattaacttgcag
caaaatccgttgacgcgcctgattttacagttgttttatccatttattcggggaaagatt
atctacacccccagaactccggcgtttgacagcgtcattcaactagtcaatgaaacattc
caagatttgaggattgtacagcgtttcgcagacagatggctgactgaaatatcgccttcc
atcaagcgttttctggatcagctggatccagaaatgataaaaaacattaccggagtcatt
accgaacgttttcctgtcatagctaatctgacatcttcactaacaaatacttctgatcaa
atcataagaataaggaaaacgttagtcaagctggatttgatcgctaatttaatcataact
tatgtagaatgctacgaattcgataaattcgaaggatatgatactgaagaagaagctgtc
gaacgtggcatggatttgatagacatcggtggattgtgggcggtaatagtattcaaaaac
caaaacgtggatctcacaacacaaaacctgccacacaacataacttacaaattacgtatg
gacagttccaaaatcgatagcacaaagaggctacgagatttctttgaaacgccaataccg
cggacgaatcccacaagagacatgaaatatttcacgtctggctacattttcctgcaggat
aagatagaacaggctattatcaagctgcagtcaaatcggacccaattgcctggaatgtat
atgcagcagtttccgagcccttgctacacttacgatactttcttcatggcgattgcgggt
ctgtttcctctctttatgattctctcgttcgtttatacctgcgccatgattgtgaagtca
attgtgcgcgaaaaagagcggcgtcttaaagaaactatgaaaaccatgggtcttggaaac
gctgttcactggatggcctggtttatcgatagcatgtcatttatgcttatttcctgcgta
ctactctcgatgatcctagtgtttggtcgggtgttagagaattcgaattttctcctggtg
ttcattttcgttttgagttttagtattgccacagtctgcttcagcttcctagtctcaacc
ttctttagccgggcaaaccttgctgctgcctgcggtggattcttcttcttcgcttgtttc
cttccttacaactttctcaacttgaacggtcaagactacagcctctcgactttggtctta
tcgagtctgctgtccgatgtatcgttcggaatcgggtgctggtattttgcaagtcatgaa
caaagtggagagggtgcacaatggagcaacatcgctgtcagtcccaaggatggcgatgca
tattctttgatgggatgcatcttgatgatgctcttcgacgctgttctctatctagtgcta
acgtggtacattgaaactgtatttccaggccagtatggtattccaaaaccgtggtatttc
atttttcagccgtcttactggtgttcggaaaagcgccgaaatagtacagttgggaccgtt
caagcacacgccgaaagagataccgaacttgtagaagaggaatcgagggacttgatggtt
ggagtgagcatccgtcatctcgggaaaacatattctaatggaaaagtcgctctttccaat
cttaatctggatttttacgaagatcagattacttcgttccttggacataatggagcaggg
aaaacaaccaccatttcaattttgacgggacttttcccgccgtctgttggtactgcaaca
atcaacggattggatatccgttaccaaatggatgatatccgccatcaacttggtgtctgt
ccacaacacaacgttctgtttgatcagctaacagtggaggaacatttgcgcttctatgct
aatttaaaaaccggagagcaaattgaatctcgtaaagaaattgacaagatgatcgatgat
ttagggttgtcacacaaaagacatgacatatctgaacatctttccggtggaatgaaaaga
aaactttcaattggagctgctttcataggaaattcaaaaacggtgatcctggacgaacct
acagcaggagtagatccttattctcggcgctccatctgggatattcttttgaaatataaa
gaaggccgaacaattattttaacaactcacttcatggatgaagctgatttactgggagac
cgtatagcgatcatttcgcaaggacagttgaagtgttgcggctcgtctctctttcttaag
caaaagcttggatccggctactaccttacggtcgtgaagaaagatggacaaagcgcctca
gtagacaacgctcaggcaactgaaaatccagtttctcaaaactcaactgaaactgatgtg
gaaaggattgtgaatgtggtgaaacgtcacatccagaatggaagcgtcgtcgagaatgta
gggtctgacatagtgttttgccttcccgagtttgacgatgcaggactccgccagcgcgat
aagtttccacacctttttgatgagctagacttgaacatggaacagcttcgtgtggatagc
tatggcgtttcggacacaacacttgaagagatatttctgaaagtagcaaatgacccctca
gaagaaaatgttaccaccccactggaaacggatcaagatgaggaagtgcctcaaatagaa
ggaaatgatacttctgatacctttaaccttctttcctctgaaaaattaacgggatcagtg
ttgatttgtcaacagttcatcgctttgtacgtgaagagattctgcaactcaaaacgaaac
ttgaaagggtttttttgcgagattgttttgcctgcattattaatcatcatcaatcaattg
actaccatgtccttgagtgccatatcgcctgagccgtctattgaactttccccttggctc
tatggaaaatcaaatgttgcattttacgcaaatcaaaatcccaacgaagtttggccagct
cgttacataaagaacatggtgaacgaaactggcatgggtgctctttgcaaaaatgataat
ttgacgaggcttcaatgtcacagtaacataacaaagctgcttaatcccctggttaaccca
gacgattaccaagatttccaatgcccctgtagcatggggatcgcttcctgtcccgtaaat
ttgactgccgcagaattaccgaggtacaaatccgtttcaaccgacgatttcatcgacgta
acagggaaagatatatcgctttggatagttcgaacctacaagaaattcaaaaagtttagg
ttcggtggattcgaatttgggcttcaaaatccatttggcaatttaaatttgaccctgttt
tcacaagatatacaagacctattgggcgctttgaggtttccattagcgcttcaggcaaac
gcatctggcgaaatcctcaatttcgaaaatcttgcacagctccgtgggacttttgataaa
gttaaagtttggtatgacaacaaagcctgggcatcttctgtttcgtatttaaatgctatt
aacaacgtaattttgcgttcgtcattaccgtcatcgaagaatgctacgttctatagtata
accgccataaaccatcctatgaattactcatttaaacagctggaagacagattcacgaga
caagtgggcatcagcgttttacacgcaatatcagtcatattctccatgagtttcgttcca
gcatcgtttgtcatctttttggtggaagagcgtaaatcaaaagcaaaacacttgcaattt
gtgtctggagtcaaacctataacgttttgggttgcagcctacacttgggatatgatcaac
tatttgatcccaagtatattggtcatcttaatttttgtgggttttgatcagcaagcgtac
atcggccccaagaatatccaagggatgatattgttattgatcctttacggcttctccgct
atccctctcatgtatccggctagtttgatcttttccgttccgagctccgcctttgtggga
ttggcgtgtggtaacttattcatcggggtgatcaccacaatttcttcttttgttcttcag
cttttcgatgatgtgcaattgaaactcattggaagtatacttaatgaagtatatctaata
tttcctcattattgtcttggtcgtggaatgatcgatatggctcaagttcactttactacc
caaaggcttgagctccttggatttgattaccagcgaaacatattcgaatgggattatctt
ggtcgatacttcttgtccatgattgttcaggccattctctttttcagttttactgtgatg
ttgcactatcaggtcctccctgaacgtgttgtacgttatttccagacaatacaacttcct
ccgctacaccttgaggacgaggatgtcgctcgtgaacgtggacgcgtggagcgaaacgat
gattcaacagacgaactacgtttgaatcggctaaccaaggtatatggtcgtagtaaggaa
ccagctacaaatagtttgtctttcggactaaagaaaggcgaatgttttggcctcttgggc
gtcaacggtgctggaaaatcgacaacttttaaaatgctgacgggtgatgaaactgttacc
agtggtaatgcctttgttggcggtcatagtattctatcggacttgagagaagcgcaacaa
agtttaggttactgtccacaagaagatgctctactatccctgcttactggcaccgagcat
ttgaaactatttgctatgcttcgtggagttccaaggaaacatatgaacaaggttgttacg
gatagtttaaagaaactaggtcttcttccatacaagaaccgttgcgctggtacctactcc
ggaggtaataaacgaaagctgtcaaccgctatcgccttcatcggcaatcccgctgtagtc
tttttggatgagccgtcaagcgggatggaccctaaagcacgtcgctcgctatggtcagct
attattgacgcattaaaagattcgcgttctatcctattgacttcacactcgatggaagag
tgtcaagttctctgcacccgcctggccattatggttaacgggacactacgttgcctgggc
tcggctcaacatctgaaaaatagatttggcaacggttatatgatcagtgcacggtgtgag
gtggaacatataagtgacgtcctgcaacatgtccagttagccataccagaagcacgattg
cgcgaacgacgatcccgtcaattgatttggcacatacaacccaacgtactatctatatca
tctttgttcaacaaaatggaggctgcacgagtaacaaccaatatgttggactattccatc
actcaaactactctggatgatgtattcgttcgatttgcgcgtcttcaaagggaaactaat
gaggaatcggacgattttgaacaagggtttgaagatttacccatgcattctcggaatgtg
gctggtctagctaatcaagagctatacgcagtctcggtcagctcggagatgtga
DBGET
integrated database retrieval system
