Daphnia magna (water flea): 116930106
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Entry
116930106 CDS
T07514
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116930106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116930106
03036 Chromosome and associated proteins [BR:
dmk03036
]
116930106
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116930106
Coactivators
SAGA/TFTC/STAGA complex
116930106
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116930106
STAGA complex
116930106
TFTC complex
116930106
SAGA complex
116930106
SLIK complex
116930106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
DSE1_N
Beta-prop_RIG_2nd
PAC11
TFIID_NTD2
CFAP251_N
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NOL10_N
RMC1_N
WD40_RFWD3
Beta-prop_HPS5
WD_LRWD1
PROPPIN
EF-G-binding_N
Beta-prop_WDR11_2nd
Beta-prop_RIG_1st
GD_AH_C
Motif
Other DBs
NCBI-GeneID:
116930106
NCBI-ProteinID:
XP_032793363
LinkDB
All DBs
AA seq
564 aa
AA seq
DB search
MEQTSSILGGNMKRSKYESIINAAGRHLLKRNCTDSDILKKNKLKLKQTTEQFENSSVWS
QKIISVQNSSLSEQEADLQFSKLKAWVESLDDGARIEIDEILFPAFISLYRKLNVSGNTS
GARGFYARNQSNFFKVPELRKMAERFCSENTSHFILELSQEPYEILHSYIGSNEHPLLQQ
LLNTTLEISIIKTKIDSSDPSQAISKSHEDSSNMEEVQDLMAAISRLDELPPTAPLLKLY
SIDTGQRRMSAASASPCQGYLSCGFQDSSVAIWDVKELRSPSLSDVSRSNLSESCAIGLY
HPVASTLTFPLESDSSVSICLGHTGAVYATQFTPNNTYMLSCSDDTTLRLWDMSSMENAV
VYRGHTYPVWAMDVSQQGQYFASASQDRTAKIWMFDRTFPLRILAGHTADVDCVTFHPNG
LYLATGSADSSVRMWHVAEGKTVRILVGHRGTVLAVAFSPCGKLLASAGEDHRVKIWDVA
AGSILHDYAGHHDVIHGLVWISENVLGSYSADGNIRVWNVTQHSFPPSQQSQQELASYSV
SAPTKIVHLGRGNQSTLVCIAASD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagcagacttcctctattttaggaggaaacatgaaaagatctaaatatgaaagcatt
attaatgctgccggtagacatcttttaaagcggaattgcacagattctgatattctgaaa
aagaacaagttaaagttgaagcagaccaccgagcaatttgaaaactcctccgtatggagc
cagaagataatttctgttcagaattctagccttagtgaacaagaagcagatcttcaattc
tcaaaattgaaggcatgggtggaatctctagatgatggtgctagaatcgaaatagatgaa
attctttttcctgcatttatttcactatacagaaaacttaatgttagtggtaacacaagt
ggagcaagagggttttatgcccgcaaccagtcaaactttttcaaagtgcctgaactccgg
aaaatggctgaaagattttgttcagaaaataccagtcattttattctggagttgtcccaa
gaaccatatgaaatacttcatagttatattggaagcaatgaacacccccttttgcaacaa
ctacttaacacaaccttggagatcagcatcattaaaacgaaaattgactccagtgatccc
tcacaagcaatttctaaatcacatgaagactcgtcaaatatggaagaagtgcaggatttg
atggctgccatttctcgattggacgaacttccgcccactgctccgttattgaagttatat
tctatcgacacaggacaaaggagaatgagtgcagcctctgcctcaccctgccaaggctat
ctttcctgtggatttcaagattcatccgtggccatctgggatgttaaagaactacgatca
ccgtctctgtcggatgttagtcggtcaaatctctctgaatcctgcgccatcggcctctat
catcccgtggcttccacattaacgttcccactggaatccgattcttccgtctctatatgt
ttgggacatactggtgctgtttatgctactcagttcacgcctaataacacttacatgctt
agctgtagcgatgacaccaccttaaggctttgggatatgtcatccatggaaaatgcagta
gtgtatcgtggacacacttaccccgtgtgggccatggatgtctcgcaacagggccagtac
ttcgcgtctgcatcacaagatcgtactgccaaaatttggatgtttgatcgtacttttccc
ttgcggattctagccggccatactgccgatgttgattgtgtgactttccatccaaatgga
ctttacttggctacgggttctgctgatagttctgtccgtatgtggcatgtcgcagagggc
aaaacagttcgcatattggttggccaccgtggcacagttttagccgttgctttcagtcct
tgtggaaagttgttagcttcagctggtgaagatcatcgcgttaagatttgggatgttgct
gctgggtctattcttcatgattatgctggccatcacgatgtaatccatggattagtctgg
atctctgagaatgttcttggctcatacagcgccgacggtaacatacgggtctggaatgtt
acgcagcattcctttcctccgtcacagcaatcacagcaagagcttgcgtcgtattcagtg
tcggcacccacgaaaatcgtacatcttggtcgtggaaaccaatcaactttggtctgcatc
gctgcttcagattag
DBGET
integrated database retrieval system
