Daphnia magna (water flea): 116930270
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Entry
116930270 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116930270
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116930270
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116930270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
DUF5318
TerY_C
Motif
Other DBs
NCBI-GeneID:
116930270
NCBI-ProteinID:
XP_032793556
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All DBs
Position
LG1:4284174..4285760
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AA seq
266 aa
AA seq
DB search
MLMSLLSIEGVGEEVILSAVAFVLALLVFGYYMMRNERREQTVHPEERENMNLLRESMRV
EPRRRYGSQNQCPVCLNDIAYEVETNCGHIFCCKCWLAYRAHGSFLGAVRCPVCRQQVTI
LFQCFTENELNPTSGSEEEPELGTFIREINSYNRRYSGEPRQFWETVRELPILFRHLVSE
IFSEGGFLYLYRLRVSLLVIGCVIYLLSPLDIIPEAAFGILGLVDDMLVLLVVSVFLTNV
YRNYIADGGNIFGRHNQAPPVSSTSN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtctttgctcagcattgaaggtgttggggaagaggttattctcagcgcagtc
gcctttgtacttgctctccttgtttttggatattacatgatgagaaatgaaagacgagaa
caaactgttcatcctgaagagagggaaaatatgaatttacttcgtgaatcaatgcgtgtt
gaaccaagaagaaggtacggctcacagaatcaatgtcccgtgtgcctaaatgatattgcc
tatgaggtggaaaccaactgtggtcacattttctgctgtaagtgctggcttgcctacaga
gctcatggtagttttttaggggcagtccgttgccctgtttgcagacagcaggttacaatc
ctgttccagtgtttcaccgagaatgaattgaaccctaccagcggatcagaagaagagccg
gagctcggcacgttcatccgcgaaattaacagctacaatcgtcgctatagcggcgaaccc
agacagttctgggaaactgtacgcgagcttcccattttgtttcgtcatcttgtaagcgaa
atcttttcggagggtggcttcctctacctgtatcgccttcgtgtcagccttctcgtcatt
ggttgtgtgatctaccttctctcaccacttgatatcataccggaagcagctttcggcatt
cttggccttgtagacgacatgttggtcctcctagtcgtcagcgttttccttacaaacgtg
taccgcaactacatagctgacggtggaaatattttcggccgtcataatcaagccccacca
gtttcgtctacatcaaattaa
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