Daphnia magna (water flea): 116930317
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Entry
116930317 CDS
T07514
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04136
Autophagy - other
dmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116930317
04136 Autophagy - other
116930317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116930317
04121 Ubiquitin system [BR:
dmk04121
]
116930317
03029 Mitochondrial biogenesis [BR:
dmk03029
]
116930317
Membrane trafficking [BR:
dmk04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116930317
Ubiquitin system [BR:
dmk04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
116930317
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116930317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
HMG_box
Motif
Other DBs
NCBI-GeneID:
116930317
NCBI-ProteinID:
XP_045035027
LinkDB
All DBs
Position
LG9:complement(3810997..3815981)
Genome browser
AA seq
211 aa
AA seq
DB search
MGTITWEEFVVGVRHILAVSDSIGDGWHFRGSLEEHGGGYLAKRMDYPVAIGEPSERTLS
ARVATIDHDSVTEPYEIDPCSIDPDSSFRPVYGEFHVLYSLAHAVPTLYLRAWRRDGSCL
EAEELWRDLTAAERRPSSDESERLRSLTQQEHPFLGEPWYHLHPCRTADMMDQIAGNDVG
RVDAKRYFIRWMSTVAPLVGCPVSHHYASFR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccataacgtgggaagagttcgtggttggagtccgtcacatattggcagtgtcc
gactcgatcggtgatggatggcattttcgtggatcactggaggagcacggtggcggttat
ctagccaaaaggatggactaccccgtagccattggagagccatcggagagaactttatcc
gcacgagtggcgacgatcgatcacgattcggtgacggaaccttatgaaattgatccgtgc
agcattgatcccgattcttctttccggcccgtctatggcgaatttcacgtgctgtacagt
ctagctcacgccgtgcctacactctatttgagagcatggagacgagatggaagctgttta
gaagctgaagaattatggagagatttaactgctgccgaacgacgtccttcatccgacgaa
tccgaacgacttcgctcgttgacgcaacaggaacatcctttcctcggtgagccatggtac
catttacatccgtgtcggacggcagacatgatggatcagatcgcaggcaacgacgtaggc
cgagttgatgcaaagcgatattttatccgatggatgtcaactgtggcccctttagtcggc
tgtcccgtgtctcatcattatgcatccttccggtaa
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