KEGG   Daphnia magna (water flea): 116930380
Entry
116930380         CDS       T07514                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03020  RNA polymerase
dmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116930380
  09124 Replication and repair
   03420 Nucleotide excision repair
    116930380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmk03021]
    116930380
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116930380
Transcription machinery [BR:dmk03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116930380
  RNA polymerase III system
   RNA polymerase III
     116930380
  RNA polymerase I system
   RNA polymerase I
     116930380
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116930380
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 116930380
NCBI-ProteinID: XP_032793693
LinkDB
Position
LG1:14042624..14043743
AA seq 210 aa
MDDESETYRMWRVRKTIMQLCHDRGYLVTQDELDQTLEQFKIQFGDKPSERRPARSDLIV
LVAHNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQSLVD
MAPKYILEYFTESELLINITEHELVPEHIVLTPEEKQELLGRYKLKENQLMRIQMGDPVA
RYFGLKRGQVVKIVRPSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaatcggaaacttatcggatgtggagagttcggaagaccattatgcagctt
tgtcacgaccggggttacctggtcactcaagatgaactggatcaaactttggagcaattt
aaaatccagtttggtgacaaaccaagtgaacgaagaccagctcgcagtgatctcattgtt
ttggttgcccacaatgatgaccctacagatcaaatgtttgttttctttcctgatgagcca
aaaattggcattaagaccatcaaaacctactgccagaggatgcaagaggaaaacataaca
agagccatcattgttgttcaacaaggcatgacaccatcagccaaacagtccctagtggat
atggctcctaaatatattttagaatacttcaccgaatctgaacttctcatcaacattact
gaacatgaattagttccagaacacattgttctcaccccagaagaaaaacaagaacttcta
ggccgttacaagttgaaagaaaaccagcttatgcgtattcagatgggtgaccctgtagca
cggtattttggtctaaaaagaggacaggtagtgaaaattgtccgtccaagtgaaactgca
gggcgctacatttcgtaccgtctcgtctgctaa

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