Daphnia magna (water flea): 116930447
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Entry
116930447 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116930447
03036 Chromosome and associated proteins [BR:
dmk03036
]
116930447
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116930447
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116930447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-met
zf-H2C2_5
zf-C2H2_jaz
Ldl_recept_b
zf-C2H2_6
DUF2577
Motif
Other DBs
NCBI-GeneID:
116930447
NCBI-ProteinID:
XP_032793749
LinkDB
All DBs
Position
LG9:complement(5159907..5163535)
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AA seq
696 aa
AA seq
DB search
MAALKQEEESISEIQNYLDTFNKEIEDPNQIPGSQLASKEAVVPHDVEANDTPEDGGTYF
VDQSGQYYYQSNDIDGGDGTATLVAQDGGTMVSIPNNGTSGDEGVVLAQGEGGYQTVTIL
PPESSSGEVSYVLIVQQPDGGEQAVISSEVLDGTEGEVIQEDEEGEDDENFDGDEDKDED
QNLAVYDFDEGEEGGSGDGQDSEDEDIKPRMTKGGAKKVTQTVSQAHMCNYCNYTSPKRY
LLSRHMKCHSEERPHKCSVCDRGFKTLASLQNHVNTHTGTKPHRCKHCHSSFTTSGELVR
HVRYRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLR
IHTGEKPYECDICHARFTQSNSLKAHKLIHTGNKPIFQCELCPTTCGRKTDLRIHVQKLH
TSEKPLKCKRCGKSFPDRYTFKLHSKTHEGXKCFKCDLCAYASISQRHLESHMLIHTDQK
PYQCDQCDQCFRQKQLLRRHQNLYHNPDYVPPPPGEKRHECPECGKPFRHKGNLIRHLAL
HDPDAAQQELRAFRAARKQRIKDGQSLEGLTEGEETDMEDEDISLGLNSNEELVSVQGQD
GQQYVVLEVIQLEGEGGDEDEATMMEVEGATEMDGSLIEGEGNTMTSLDDEIEDSMQATP
RVRRSSQVAKAQDTSKDVANCFGFDDDDEEDEDDDK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttgaagcaagaagaagaatctataagtgagatacaaaattatctcgatact
ttcaacaaggaaattgaagatccaaaccagataccaggttcccaactagcaagcaaagaa
gcagttgttccacatgatgtagaagctaatgatacacctgaagatggtggcacctatttt
gtggaccagagtggacagtactactatcaaagcaatgacattgatggaggagatggtaca
gctactcttgttgcccaagatggaggtaccatggtgtctattcctaacaatggaacttca
ggagatgaaggagttgtgcttgcgcaaggtgaaggtggctaccaaacggttaccatcctc
cccccagaatcatcttcaggtgaggttagctatgttttgattgtacagcaaccggatgga
ggtgagcaagctgtgatttcatctgaggttcttgatggtactgaaggtgaagttatacaa
gaagatgaagaaggtgaagatgatgagaattttgatggagatgaagataaagatgaggac
caaaatctagctgtatatgacttcgacgaaggtgaagaaggtggtagtggcgatggtcag
gattccgaggatgaagatatcaaaccaagaatgaccaaaggtggtgcgaagaaagttaca
cagaccgtctcacaagcgcatatgtgtaattattgtaattacaccagccctaagcgatat
ctgttgtctcggcacatgaaatgtcattccgaggagcgtccgcacaagtgcagtgtatgt
gaccgaggattcaagaccttggcttcacttcaaaaccatgttaacactcatacgggcaca
aagccacatcgatgcaaacattgccatagttcgttcacaacttcgggagagctcgttcgc
cacgtacgctaccgtcacacacacgagaaaccacatcgttgcaccgagtgcgactacgct
tccgtcgagttaagcaagctcaaacgtcatatgaggtgccacactggtgagcggccgtac
cagtgtccccactgtacgtatgccagcccagacacattcaagttgaagcgacatttgcgc
atacatactggtgaaaaaccttacgaatgcgatatttgccatgcacgattcacgcaatcc
aacagtctcaaggctcataaactcatccacacagggaataaaccgattttccagtgtgaa
ctgtgtccaaccacttgtggccgaaagactgatctgcgaattcacgttcaaaaattgcac
acgtcagagaagcccttaaaatgcaaaagatgtggcaaatctttccccgatcgctatact
ttcaagttgcacagcaaaactcacgaagggngaaaatgctttaagtgcgacctttgtgct
tacgcatcgatctcgcaacgccacttggaatcacacatgctgattcacaccgaccagaaa
ccttatcagtgcgatcagtgcgatcagtgcttccggcaaaagcagttattacgccgtcac
caaaacttgtaccacaatcccgattacgtgcctcctccgcctggagagaaacggcacgaa
tgtccggaatgtggaaaacccttccgccataaaggcaatcttattcgtcatttggctctt
catgatccagatgccgctcagcaagagttgcgagccttccgtgctgctcgcaaacagcgt
attaaggatggccagagtttagaagggcttacggaaggggaagagacagatatggaggat
gaagacataagccttggtctcaactccaatgaagaattggtctctgttcaaggtcaagat
gggcagcaatacgttgtccttgaagttatccagttagagggtgaaggcggagacgaagac
gaagccaccatgatggaagtagagggggctacagaaatggacggttccttgatagaagga
gaaggcaataccatgacctctttggatgatgaaatagaggattccatgcaagccactcct
cgggtacgtcgtagttctcaggttgctaaagctcaggataccagtaaggacgtggcgaac
tgtttcggattcgatgatgacgatgaagaagacgaggacgatgacaagtga
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