Daphnia magna (water flea): 116930647
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Entry
116930647 CDS
T07514
Name
(RefSeq) syntaxin isoform X1
KO
K04560
syntaxin 1A
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116930647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116930647
Membrane trafficking [BR:
dmk04131
]
SNARE
Syntaxin (Qa)
Stx-PM
116930647
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ETRAMP
DUF4600
Synaptobrevin
ICEA
SOAR
Motif
Other DBs
NCBI-GeneID:
116930647
NCBI-ProteinID:
XP_032793932
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All DBs
Position
LG9:complement(3518215..3519964)
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AA seq
305 aa
AA seq
DB search
MTKDRLADLQGVCKRRASTFGDDGFPDDSALDFGYRLLMECEYLNDFLADACKVREQIDW
LKTTVQEVKKKQSTILSAPVISGGARKELDDLISSIKKVAKGIQQKLKDFKIEIERARKD
NPTSAEPRIREMQYETLTRNFVDVMVECNAIQDEHRQRCKERFQRQLEIAGHSTSDEQLE
KMLEQNNPSIFTQEIESETVQARQILGDIEARHKDLLKLELSILELNSLYNDMAVLVNNQ
GDLIDRIAYNVENAVEFVGKAAKHTKKAIIHKKRLRWKRIIIISIIAGIVLIIVGSIVGG
CLSKR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggaccgtttggctgatcttcaaggggtttgtaaacggcgagcgagtacgttc
ggagacgatggatttcctgacgatagtgccctggatttcggttacagacttcttatggag
tgtgaatatctaaatgattttttggccgatgcttgtaaggtacgggaacagatcgattgg
ttgaaaacaacagtccaggaagtaaaaaagaaacagagcaccatcttgtcggcaccagtg
ataagtggcggagcaaggaaggaacttgatgacttgataagttctataaagaaggtggcc
aaaggaatccaacaaaaacttaaagatttcaaaatagaaatagagcgtgcaaggaaagat
aacccaacttctgcagagcctcggatacgtgaaatgcaatatgaaactttaaccagaaat
tttgtcgacgtcatggtcgaatgtaatgctatacaggacgagcatcgccaaagatgcaag
gagcgattccagcggcaattagaaatcgctgggcattcaacaagcgacgagcagttggaa
aaaatgctagaacaaaacaacccatccatttttacacaagagattgagtctgaaaccgtg
caagcacgtcaaattttaggcgatattgaggctcgccataaagatttgttgaagttagaa
ctgtccatacttgaattgaactccttatacaatgatatggcggtgttggttaacaaccag
ggagacttgatcgatcgtattgcctacaacgtcgagaatgctgtcgaatttgttgggaaa
gccgccaaacatacgaaaaaagcaattatacataagaagcgtctacgatggaaacgtata
ataattatctcaatcattgctgggatcgtactcatcatagttggttccatcgtaggcggc
tgcctcagcaagaggtag
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