Daphnia magna (water flea): 116930954
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Entry
116930954 CDS
T07514
Name
(RefSeq) endoplasmic reticulum membrane-associated RNA degradation protein isoform X1
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116930954
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Gene cluster
GFIT
Motif
Pfam:
DUF4209
Motif
Other DBs
NCBI-GeneID:
116930954
NCBI-ProteinID:
XP_045034794
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Position
LG9:complement(2507138..2509634)
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AA seq
615 aa
AA seq
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MIYWNWIFQMFRLSYETLKKTCFTQTQLSVMQNGTAKSLRMLHPFLQNVRMKMKAYARRG
IKRKDEVALNCHECLLLITAALERALGNVYCVIHYLIADITHIMTHILSFKLFLHGDRNK
KVPSLFRDLLASQELLVILGISQVILLQLLLGSPLSLNLRNLIWHGFVGFLDWDTHGYAS
VLLFVCVSIGRHLDGCLINEIIPRRWATFKQHQQGRKWPKWSEFMEEEMLVEAVSKTRGL
PCSRKAIWLRAIKYHQEGSYGRCCALMMPEIEHTLRLIYCAVNECPARALTAESVVHYTT
LDVIFECGNEDESNKTRMAEFLGNGLFLALLDIFVQTEGPRVRDRFSHGECQLWDIDFQL
SRHLLALSAAILWRADEEKVSCAPHYSPDYTPAALFHGELIQTLQAIEHWLCLAIVDVDQ
PVIDLSAWPAQCLPLISDWLHNWSTSVNQLLINHLEEENSRQISHLVIKTHRCPLSATWR
RMMSQIVLGSQRLTAHYNERNSSASSTLSSWSLRSRQRSTHARLDSYMCLFVRAVQLSLL
FPIAVSCGGQVIVNHAPTVRRMKRNVTRWADNFASASVNNRWVDLAECATESIQSMEILL
ASVVVFVLQNSQIRS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgatctactggaactggatatttcaaatgtttcgtctctcttacgaaacgctgaagaaa
acttgcttcacccagacccaactcagcgtaatgcagaatggtacagccaaatcattgagg
atgttgcaccctttcttgcaaaatgttagaatgaaaatgaaggcttatgccagaagagga
attaaaaggaaagatgaagtagctctcaactgccatgaatgccttctgctcataactgct
gcacttgagagagctcttggcaatgtatattgtgtcattcactacttaatagctgatata
actcacattatgacacacattctttcttttaagttgtttctacatggagatcgaaacaaa
aaggtcccatcgttgttccgggatctgttggcctcccaagagttgctcgtgatactgggc
atatcgcaagtaatccttttacagctgttgcttggcagtcccctgtctcttaatttgaga
aacctcatatggcacggcttcgttggttttctcgactgggacacccatggctatgcttcc
gtcttgttattcgtctgcgtttctataggtcgacatttggatggctgcctgatcaatgaa
atcatcccgagacgctgggctactttcaagcagcatcagcagggacgcaagtggccaaaa
tggtcggagtttatggaagaagagatgttggtggaagcggtttcaaaaacgcgaggactt
ccctgcagccgcaaggccatttggctacgagccattaagtaccatcaggagggctcctac
ggtcgatgctgtgcactcatgatgcccgaaatagagcacacgctccgattgatttactgc
gctgtaaatgagtgccctgcgcgagctctgactgctgaatcggtcgttcactatacgacg
ctcgacgtcatctttgaatgcggcaacgaagatgaatcaaacaaaacccgtatggccgag
tttttgggaaacggactttttcttgccttgctcgatatttttgtccaaactgaaggtcca
agagttcgcgatcggttcagtcatggcgagtgtcaattgtgggatatcgacttccaattg
tctagacacttgctcgcattatcggcagcaattctatggcgagccgatgaggagaaagtc
tcttgcgctcctcactattcaccggattacaccccagccgctttatttcatggcgaactg
attcaaactctccaagccatcgaacattggctttgtttggctatcgtcgacgtcgaccag
cctgtcatcgacttatccgcctggccagcccaatgcctcccgttgattagcgactggctt
cataactggtccacttcggttaatcagctattaataaatcaccttgaagaagagaatagc
cggcaaataagccatcttgtcatcaagacacaccgttgtccgctatcggccacctggcgt
cgaatgatgagccagatcgtattgggtagccaacgcttgacggctcactataacgaaaga
aatagtagtgcttcaagtacattgtcgtcttggtcgttacggtctcgacagcgatccact
catgcccggctggacagttacatgtgcctattcgtaagggctgtccaactttccttgctc
tttcccatagccgtcagttgtggaggccaagtcattgtcaaccatgcaccgacagtgcgg
cgaatgaaacggaacgtcactcgctgggctgacaatttcgccagtgcgtcagtcaataac
cgttgggtggatctggcagaatgcgcaacagaatcgattcaatcaatggaaattctcctt
gcatccgtcgtcgtctttgtcctccaaaattctcagatccggagctaa
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