Daphnia magna (water flea): 116931074
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Entry
116931074 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmk03037
]
116931074
Cilium and associated proteins [BR:
dmk03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116931074
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
DUF4350
OST48_N
DUF2194
Motif
Other DBs
NCBI-GeneID:
116931074
NCBI-ProteinID:
XP_032794461
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Position
LG9:complement(2913855..2915645)
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AA seq
435 aa
AA seq
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MVPVPISGFAPSAVSSPSRSDVSSTILFDTSKSNQFGVNDGLRSIQRLLKNRWRLANTKD
RLNIESLSSSRLAILAGPQERYNEAEFNALRQFIDLGGNLLVLLGEGGEQQFNTNINFLL
EEYGIMINNDAVISTMYQKYFHPKECFIEEVQSWMANSTSPTAEATTNTTKIVYPYGATL
NVAKPAVVMATTTTAAFPQQRPIAATYTNPRLKGNGGKIAVIGSVHIFSDSYIDKEDNKR
WLEDLVDYLTDSKAIIADLDRDLDIAEYATVPNVMQLSQHPRVCLTESEEVPQDWTTLFQ
TKLFNLDTHLVPKILESYQQVGVKHETLKLIPPQFETPLPGLQVAVFPPLFRTLNAPPLE
LYDLDAEFSSEKNRLAQLTNRCNDSDLEYYIIEAGHILNIIPQLKLVGNNNAERAKQILH
HVVERISQFKKSTPI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggttccggttccgattagcgggtttgctccgtcggcagtaagttctccgtcccgcagt
gatgtttccagcacgattttattcgacacttcaaagagtaatcagttcggtgtcaacgac
ggtttgaggtcaatacaaaggttgctaaaaaatcgctggagattagcgaacacgaaagat
cggctcaacattgaatccttgagttcttctcggctggcaattttggctggaccgcaggaa
cgttacaatgaggctgaattcaatgcccttcgacagtttatcgatcttggaggcaatctt
ctagtgttgttgggagaaggtggagaacagcaattcaacaccaacataaatttcctgctc
gaagagtatggcatcatgattaataacgacgccgtgatcagtacaatgtaccagaaatat
ttccaccctaaggaatgtttcattgaagaggtccagtcatggatggcaaattcgacgtcg
ccgactgcagaagccactacaaacaccactaaaattgtctatccgtacggagcaacgttg
aatgtagcaaagccagcagttgtcatggcaacaacgactaccgctgccttcccgcaacag
cgtcccatcgctgccacctacaccaatccgaggttaaagggtaacggaggtaaaatcgcc
gtcatcggttcagttcacatcttttccgacagctacattgacaaggaggataacaaacga
tggctcgaagacctggtcgactacctgacggatagtaaagctattattgccgacttagac
cgcgaccttgatattgccgagtacgctacagtcccgaatgtgatgcaactgtcacagcat
ccccgtgtttgcttaacggaatcagaagaagtgcctcaagattggacgactcttttccag
accaaactgttcaacttggatacgcatttggtgccgaagatcttagaatcgtatcagcaa
gtcggtgtcaagcacgaaactttaaaattgattccgccgcaattcgaaactccgctgccc
ggtttacaagttgctgttttcccaccactatttcgtactttaaacgctccgccgctggaa
ttgtacgatttggatgccgaattcagttccgagaagaatcgattggctcagctgactaat
cgttgcaatgatagtgatttggaatactacatcattgaagctgggcatatacttaacatt
atacctcaattaaaactggttggcaataacaacgcagaacgagccaaacaaatacttcat
catgttgtggagcgtatttctcaattcaaaaaatctactcccatctga
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