KEGG   Daphnia magna (water flea): 116931527
Entry
116931527         CDS       T07514                                 
Name
(RefSeq) cyclin-H
  KO
K06634  cyclin H
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03022  Basal transcription factors
dmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116931527
  09124 Replication and repair
   03420 Nucleotide excision repair
    116931527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmk03021]
    116931527
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116931527
Transcription machinery [BR:dmk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     116931527
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     116931527
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB NIF MetOD2 dnstrm_HI1420
Other DBs
NCBI-GeneID: 116931527
NCBI-ProteinID: XP_032795009
LinkDB
Position
LG1:17324912..17326612
AA seq 328 aa
MFATSTQRHFWMFKDETDVSNARLSANIKYISSRGRNMTVIEREAHFLNVIEEKSLIMSY
EYQLRDFCRKFHPPMPRYVIGTALHYLKRFYVNNSVMDYPPKEILVTCVYLACKVEEFNV
SMDQFVGNLKGDREKAAAIILNNELLLMQQLDYQLTVHNPFRPLEGLMIDMKTRFPTFSD
PERLRPGIDEFLEQVFYTDAILIYSPSQISLAAIIHSASTSKENVDEYITKILFSEDQKR
LLNLIEAVKKIRVMVRNVQLPHRDTIKALEKKLALCCNPDNNSESPAFKKRMKQSFDEEE
SFEDGQYPSASSDQVRSMLMGLSEMGKI
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtttgcaacgagcacccaacggcatttttggatgtttaaagatgaaactgatgtttct
aatgccagacttagtgcaaacattaaatacatttccagtagagggagaaacatgacagtt
atagagcgtgaagcacattttttgaacgttatcgaggaaaaaagtttgattatgagttat
gagtaccagctgagggacttctgcagaaaattccatccccctatgccccgctatgtaata
ggaacagctttacactacctcaaacgtttttatgtgaataactctgtcatggactatcca
ccaaaagaaatccttgtgacctgtgtctacttggcttgtaaagttgaggagttcaatgtt
tcgatggatcaatttgttggtaacttgaaaggagacagggaaaaggctgctgccattatt
ttgaacaatgaactacttctaatgcaacaacttgactaccagctgactgtccataatcca
tttcgaccacttgaaggtttgatgattgacatgaagacacgttttccaaccttcagtgat
cctgagaggctgcggccaggaattgatgaatttcttgaacaagttttttatactgatgct
atattgatctactccccatctcaaatatctcttgcagcaattattcattcggcgagtacg
tcgaaagagaatgtggatgaatacataacaaaaattctattttcggaagatcaaaagcgt
ttgttaaatctcatagaagcagtgaaaaaaatccgtgtaatggtgcggaacgtccaacta
cctcaccgagatacaatcaaagctttggaaaagaagcttgcactctgctgcaaccctgac
aataatagtgaaagcccggcgtttaaaaagagaatgaagcagtctttcgacgaggaggaa
tcttttgaagatggacaatatccgtccgcgagctcagatcaagttcgtagcatgttgatg
ggtttatccgaaatgggcaagatatga

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