Daphnia magna (water flea): 116931527
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Entry
116931527 CDS
T07514
Name
(RefSeq) cyclin-H
KO
K06634
cyclin H
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03022
Basal transcription factors
dmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116931527
09124 Replication and repair
03420 Nucleotide excision repair
116931527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116931527
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116931527
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116931527
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116931527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
NIF
MetOD2
dnstrm_HI1420
Motif
Other DBs
NCBI-GeneID:
116931527
NCBI-ProteinID:
XP_032795009
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Position
LG1:17324912..17326612
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AA seq
328 aa
AA seq
DB search
MFATSTQRHFWMFKDETDVSNARLSANIKYISSRGRNMTVIEREAHFLNVIEEKSLIMSY
EYQLRDFCRKFHPPMPRYVIGTALHYLKRFYVNNSVMDYPPKEILVTCVYLACKVEEFNV
SMDQFVGNLKGDREKAAAIILNNELLLMQQLDYQLTVHNPFRPLEGLMIDMKTRFPTFSD
PERLRPGIDEFLEQVFYTDAILIYSPSQISLAAIIHSASTSKENVDEYITKILFSEDQKR
LLNLIEAVKKIRVMVRNVQLPHRDTIKALEKKLALCCNPDNNSESPAFKKRMKQSFDEEE
SFEDGQYPSASSDQVRSMLMGLSEMGKI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaacgagcacccaacggcatttttggatgtttaaagatgaaactgatgtttct
aatgccagacttagtgcaaacattaaatacatttccagtagagggagaaacatgacagtt
atagagcgtgaagcacattttttgaacgttatcgaggaaaaaagtttgattatgagttat
gagtaccagctgagggacttctgcagaaaattccatccccctatgccccgctatgtaata
ggaacagctttacactacctcaaacgtttttatgtgaataactctgtcatggactatcca
ccaaaagaaatccttgtgacctgtgtctacttggcttgtaaagttgaggagttcaatgtt
tcgatggatcaatttgttggtaacttgaaaggagacagggaaaaggctgctgccattatt
ttgaacaatgaactacttctaatgcaacaacttgactaccagctgactgtccataatcca
tttcgaccacttgaaggtttgatgattgacatgaagacacgttttccaaccttcagtgat
cctgagaggctgcggccaggaattgatgaatttcttgaacaagttttttatactgatgct
atattgatctactccccatctcaaatatctcttgcagcaattattcattcggcgagtacg
tcgaaagagaatgtggatgaatacataacaaaaattctattttcggaagatcaaaagcgt
ttgttaaatctcatagaagcagtgaaaaaaatccgtgtaatggtgcggaacgtccaacta
cctcaccgagatacaatcaaagctttggaaaagaagcttgcactctgctgcaaccctgac
aataatagtgaaagcccggcgtttaaaaagagaatgaagcagtctttcgacgaggaggaa
tcttttgaagatggacaatatccgtccgcgagctcagatcaagttcgtagcatgttgatg
ggtttatccgaaatgggcaagatatga
DBGET
integrated database retrieval system