Daphnia magna (water flea): 116931560
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Entry
116931560 CDS
T07514
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116931560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116931560
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116931560
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116931560
Exosomal proteins of bladder cancer cells
116931560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
PHF5
Motif
Other DBs
NCBI-GeneID:
116931560
NCBI-ProteinID:
XP_032795047
LinkDB
All DBs
Position
LG10:complement(6636362..6641226)
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AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHSGVIQLWDYRMCALLDKFDEHDGPVRGICFH
SQQPLFVSGGDDYKIKVWNYKLRRCQFTLSGHMDYIRTTVFHHEYPWILSASDDQTIRIW
NWQSRACVSVLTGHNHYVMCAQFHPSEDLIVSASLDQTVRVWDISGLRKKNVAPGPGGLD
DHLRNPGATDLFGQADAVVRHVLEGHDRGVNWAAFHPTLPLVISGADDRQIKLWRMSESK
AWEVDTCRGHYNNVSCVLFHPKQELILSNSEDKSIRVWDLTKRTCLNTFRREHDRFWVMA
AHPTLGLFAAGHDSGMVIFKLERERPAYSLHGNLLFYVKERTLRRLDLTTSKDTGLLQLR
GNARTPIHSISYNPAEQAVLVVTRAANLENSIYELYSVPVDADCPQDGGDGKRSTGVTAI
WVARNRFAVLDRNHTIVIKNEKNEVSKKIQTPPCDEIFYAGTGCVLLRDTEGLTLFDIQQ
KRSAGQVKMTKCRHVVWSADMSHVALLGKHVLTIANRRLEVLCTIQENARLKSATWEDSG
VLIYTTSHHIKYSLINGDHGIIRTLDLPVYLTRVKGKAIYCLDRDARPRMFQVDPTEYCF
KLALVNRKYDEVLHMVRHAKLVGQSIIAYLQQKGYPEVALHFVKDEKTRLALALQCGNIE
AALEAAKALDDKYCWEKLGEAALLQGNHQVVEMCYQRTKNFNKLAFLYLITGNLDKLKKM
MKIAEIRKDTSGQYQSALLLGDMQERVKVLRNCGQTSLAFLTAATHGLNEEAEQLQQQLE
AAGQPVPKTNPSAVFLQPPPPIAQAESNWPLLTVSKGFFDGAMAARTIASGSAIVAEEDT
GEPDGWGDDADLGLDDEDKPAGSAGDVGSGDEEGGWEVGDEDLELPSDLSVAAHGGEDED
RGYYVPPTRGQPPMQGWATHSQLVVDHASAGSYESAFRLLNDQIGVVNFAPFKPLFTAAF
AKSRTMFAGLPNLPSLSAYPQRNWREVAASSKVHGLPALGVRLADLAQRLQICYQLTTAG
KFNEAVDRFRLLLLNVPLLVVDNKEEVRKAQELISICREYIVGLSMEAARKDLPKESLED
QKRSCEMAAYFTHSELQPIHQILTLRTALNLSFKLKNFRTAASFARRLLELGPKPEVAQQ
TRKILQACDKGANDEVQLHYDEHNPFNLCAKTYTPIYRGKPEEKCPLCSSVYQPSLKGTL
CQVCTVAEIGKDCIGLRISTSQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgcttactaaatttgaaacaaagtcggccagagttaaaggtctttcattccatcctaaa
cgaccatggattctcacgagtttgcatagcggagttattcagctatgggattatcgcatg
tgtgctctactggataaattcgacgagcacgatgggcctgtacgtggaatctgtttccat
agtcagcagcccctttttgtctctggtggtgatgattacaaaatcaaggtctggaactac
aagttaaggcgctgtcagttcacgctgtctggccacatggactatattcgcaccacagtc
ttccatcatgaatatccctggattttgagtgcctctgatgatcaaactataagaatctgg
aactggcagagcagagcatgtgtttctgttctaactggccataaccactatgttatgtgt
gcccagtttcatcctagtgaagacctgattgtttctgcatctttggatcagactgtcaga
gtttgggatatttctggtctaagaaaaaagaatgtcgcaccgggtcctggaggacttgat
gaccacctacgtaatcctggggctaccgacttattcggtcaagccgacgcagtagttcgc
catgttttggagggtcatgatcgaggggttaattgggcagcattccacccgacacttccg
ttggtcatatccggtgcagacgatcgtcaaatcaaactatggcgaatgagcgaatctaag
gcatgggaagtcgatacctgccgaggtcactacaacaacgtatcttgcgtcttattccac
cctaaacaagagttgatcctttcgaattcggaagacaagagtattcgcgtgtgggatctg
acgaagcgaacgtgtctgaataccttccgccgcgaacatgaccgtttctgggtgatggcc
gcccatccgaccttgggtcttttcgcagccggacatgattccggaatggtgatcttcaaa
ctagagcgagaaagacctgcttacagtttgcatggcaacctgctattttacgtcaaggaa
cgtactctccgacgactcgatcttactacatcgaaggatactggtttgctgcaactgaga
ggcaatgctcgtacgccaatccatagtatctcttacaatccggccgagcaagccgttctc
gtggtcactcgagcagcaaacctggaaaattccatttacgagctatactcggtgccagta
gatgccgattgccctcaagatggtggcgatggaaaacgctcgacgggtgtaacggccatt
tgggttgctcgtaaccgcttcgccgtcttggaccgcaatcatacgattgtcataaaaaat
gaaaagaatgaagtgagcaagaaaatccaaacacccccgtgtgatgaaatcttctacgct
ggaactgggtgcgttttacttcgtgataccgaaggtcttaccctctttgatatccagcag
aaacgaagtgccggacaggttaaaatgacgaaatgtcgccatgtcgtttggtcggcggac
atgagtcatgtggcgctcttgggaaagcacgttttgactatcgccaatcgtcgtctagaa
gtgctgtgcaccatccaggaaaatgcaagacttaaatcggccacctgggaagattctggc
gttctgatctacaccactagccatcatatcaaatattctttgatcaacggcgatcatggc
atcatccgcaccctagatctacccgtttatcttacacgcgttaagggcaaggctatatat
tgccttgatcgtgatgctcgcccacgcatgttccaggtggaccccaccgagtattgcttc
aaactggctttggtgaaccgaaaatacgatgaagtcttgcacatggttcgacatgccaaa
cttgtcgggcaatccattatcgcctatttacagcaaaaaggttatccggaagttgcgctt
catttcgtcaaagatgaaaaaactcgtctggctttggctcttcagtgtggcaacattgaa
gcagctcttgaggctgccaaagcgcttgacgacaaatattgttgggagaaacttggcgaa
gctgcccttttacaaggcaaccaccaagtcgtggagatgtgctatcaacgtaccaaaaac
tttaataagctagccttcttgtatttgatcaccggcaacctcgataaactgaagaaaatg
atgaagattgccgaaatccgcaaggacacttcgggtcaatatcagtcggctcttttgctc
ggtgatatgcaagaacgagttaaggtccttcgtaattgcggacagactagcttggctttc
ctgaccgcggccacccacggccttaatgaggaagccgagcagctacagcaacaacttgaa
gcagccgggcaaccagtaccaaaaacaaatccatctgctgttttcttgcaacctcctcct
ccaattgcccaggcggaatccaactggcccttgctgaccgtctctaagggatttttcgat
ggagccatggctgcccgtacgattgcctcaggatccgccattgtagcagaagaagacact
ggtgagcctgacggctggggtgatgacgctgatcttggtttggacgatgaggataaacca
gcaggatctgctggcgacgtcgggagcggagatgaagaaggcggctgggaagtgggcgac
gaagatttggagcttccgtctgatttgagtgttgctgctcatggcggggaagatgaagac
cgtggatactatgtgccacctacccggggtcaaccgcctatgcagggatgggcaactcac
tcgcagttggttgttgatcacgcttcggctggctcctacgaatctgctttccgtctcctc
aacgaccagattggtgtggtcaattttgcgccatttaagcctctatttaccgcagccttc
gccaaatcacgaactatgtttgctggattacccaatctaccttccttgtcggcataccca
cagcgtaactggagggaagttgctgcttcatcgaaagttcacggattacctgccctaggt
gttcgcctggctgatctagctcaaaggcttcagatctgctaccaactgactactgcgggt
aaattcaacgaggccgttgaccgattccgtctccttttgttgaacgtcccgctgttggtg
gtcgacaacaaagaagaagttcgcaaagcccaggaattaatatccatctgccgggagtac
attgtcggcctcagcatggaagccgctcggaaagatttgcccaaggagagtttagaggat
caaaagcgtagctgtgaaatggcggcttatttcacccactcggaactgcagcctatccat
cagattcttactctgagaacggcgcttaatcttagtttcaaactcaagaactttcgcaca
gcggcttcctttgcccgtcgcctgctggaacttggacctaagcccgaagtagcccaacag
acacgcaaaatactacaggcttgcgacaaaggtgcaaacgacgaagttcaacttcattac
gatgagcacaacccattcaatttgtgtgccaaaacttacacaccaatctaccgcggcaag
ccggaagaaaagtgcccgctttgcagttcagtctaccagccttcattaaagggaactctt
tgtcaagtttgcactgttgctgaaattggaaaggattgcatcggcttgcgaataagcacc
tcccaattccgatag
DBGET
integrated database retrieval system
