Daphnia magna (water flea): 116931653
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Entry
116931653 CDS
T07514
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116931653
Enzymes [BR:
dmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
116931653
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116931653
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
116931653
NCBI-ProteinID:
XP_032795136
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Position
LG10:complement(418790..426733)
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AA seq
420 aa
AA seq
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MASSDNTKAVTCAYFLQTKKRYCRMSVKPGRKFCGEHASLDAANQVCPTSAAKYARTPCP
YDPNHSCFVSQLAKHMEKCNSKPKPLPEYIKENINVIDNNEEIKVNLGTLSDEELLAIIA
RVSKIHSEYVGELPVSVGRHPVLETTLASLTESRGSWRHVFQSSSILYNMAEVGVLTSGE
TRSTYVEFGSGRGQLSYAVGQAVDLETDALLMIDKSSPRHKHDNRYKVDGESHASIHRVR
ADIADVDLGQVPLVRNDTRRLVGIGKHLCGAATDLALNCLYRANNPNGLVQGVCIALCCH
HQCTWRHYVGKAFFKELNLSQTDFAILRAMTSWAVCGSRQAKEHSEAVQDNEVKTSILPG
RYAAMGLDIERRENIGRQCKQIIDRGRVEFLSSWPLQAKLLYYVEPDISPENVLLLAHAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtccgacaatacaaaagcggtgacgtgcgcatactttttacagacaaagaaa
agatattgccgcatgtcggttaaaccgggacggaagttctgcggggaacacgcgtcattg
gatgctgcgaaccaagtctgtcctacttccgctgctaaatatgcacgaacgccctgtcca
tacgatccaaatcattcatgttttgtatcacaattggcgaagcacatggagaagtgtaac
tcgaaacccaaaccgctgccggaatacataaaggaaaacattaatgtcattgacaacaat
gaggagatcaaagtcaaccttggaactttgtcagacgaagaactactagccatcattgcc
agggtttccaagatccattcagaatatgttggagaactgccagtgtctgttgggcgtcat
ccagtgctagaaactacacttgcttcgctgacggagagtcgaggaagttggcgtcacgtc
ttccaaagctcttccatcctttacaatatggccgaagttggtgttttgacgtctggggaa
acgagaagcacatatgtcgaatttggctcaggcagagggcagttgagttacgcggtaggt
caggccgttgacctggaaacggatgctttgctgatgatcgacaagtcttcacccaggcac
aagcacgacaaccggtacaaggtggacggtgaaagccatgcttccatccaccgagtgcga
gcagacattgctgacgtggatttgggacaggtaccgctcgttcgcaacgacacaagaaga
cttgtcggaatcggcaaacacttgtgtggagcagcgacagatttagcgttaaattgcctc
tatagagccaataatccgaatggattggtacagggagtttgcatagctctttgctgccat
catcagtgcacctggcgacactacgtcgggaaagcattcttcaaggaattaaatctgagc
cagacggattttgctatcttgagagccatgacgagctgggcagtatgtggatcacgtcag
gcaaaagaacacagtgaggctgttcaagataacgaagtcaaaaccagcattttacccgga
agatacgcagccatgggtttggatatcgaacgcagggaaaatatcggacgtcagtgcaaa
caaatcattgaccgtggccgagtcgaatttctgtcttcgtggccacttcaggccaagctt
ttgtactacgtcgagccggacatttctcctgagaatgttctcttgcttgcgcatgcttcg
taa
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