Daphnia magna (water flea): 116931662
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Entry
116931662 CDS
T07514
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116931662
Enzymes [BR:
dmk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
116931662
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116931662
Prokaryotic type
116931662
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
116931662
NCBI-ProteinID:
XP_032795156
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Position
LG1:2557869..2562010
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AA seq
763 aa
AA seq
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MEAKQRMKLSEVKDVPIKKPVNVLEALAKYKLKKQQEQEQKMMDTSEDKKKREIRDLERR
LSVESTKATRTQYAVTKFNMVKKPFIPKNNVVFGSTKQGKKRITEIKGPENTKRTYFKEN
KQDLAAKPQERGNCLKRDCEFGITEFVSQRRGFTAIVGHHLFDTQIHEICLDGSIVHLTT
KHSPSSSFVVKRYPTEDEQLAVFEAEHWNTIEDMFKTGKPEVVEIDVTGKSKPEKKKILR
ILNMKYDDVVNNTVSVDGKKILKISKKKKKNRQGQQQRNISTYTQFVLYKENHTTMEALN
IIAQKLKMESECFTIAGTKDKKAVTSQLVTVKNVEPHLLFRSMKQNASISVGNFSYAENP
VRSGNLRGNRFTIALRNVIGNECKISANLNSLKETGFINYYEPQRFGTRHIPTHFIGKQL
LLGRWKEAINLILDPGNLNGNLPFKPDVTRALIEYKSSNDAQKAFAKITGKCKTIEAKLL
LSLSKCEGDVVGALNTISRNSRVMYMRAYQCFIWNTIASKRLATFGSQPIIGDLVYAPNN
NENAKQKNKNLEMEKKSLIEMVGDRDDCGKNGQGNHRKVIFIDESNIRKYTVHDVVLPLP
GCHIVYPANQIAVWYQELLQADGLTEEDFSRSFKMFDLSGMYRYMVSKPFDVKWKFVHYD
DPNATLILSDRDRLKKKRQLHPAIQGSKYRGLVLEFSLSAFAFASMVIREITKMDMTTEF
HANFKKAKKIIKTKRANRRWKVRDVKSCLNHVKAKSLQKHPLR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaagcagagaatgaaattgtctgaagtaaaggatgtgccaataaaaaaacca
gtaaatgttctggaagcgttggcaaaatacaagttgaaaaagcaacaagaacaggaacaa
aaaatgatggacacatcagaagataaaaagaaacgagagattagagatttagagagaaga
ctatccgtagaatccaccaaggcaacaagaactcaatatgcagtcacaaagttcaacatg
gtaaaaaaaccgttcattccaaaaaacaatgtggtgtttggttcaactaaacaaggaaaa
aaaaggataactgaaatcaaaggaccagaaaatactaagagaacctattttaaagaaaac
aaacaggatttggcagcaaaaccgcaagaaagaggaaattgtttaaaacgtgattgtgaa
tttggcatcactgaatttgtttcacaacgccgaggctttacagctattgtaggacaccat
ttgtttgacacccagatacatgaaatctgtttggatggatccattgttcatttaacaacc
aagcactctcctagttcaagttttgttgtcaaacgttatccaacagaggatgagcaactt
gctgtttttgaagctgaacattggaacactattgaagatatgttcaaaactggaaaaccg
gaggttgttgaaatagatgtcacgggaaagagtaaaccagaaaaaaagaagatcctgaga
attttgaacatgaaatatgatgatgttgtcaacaatacagtctctgttgatgggaaaaaa
atcttaaagatttcaaaaaaaaaaaaaaagaatcggcaagggcaacaacaaagaaatata
tcaacttatactcagttcgtcctgtataaggaaaaccatactacaatggaggcattaaac
ataattgcccaaaaacttaagatggaatcagaatgttttacgattgctggaaccaaagac
aaaaaagctgttacaagtcagctggtaaccgtaaaaaacgtggaacctcatttgttgttc
agaagtatgaaacagaatgcgagcatttcagttggaaacttttcctacgctgaaaatcct
gttcgttcaggaaacctgaggggtaaccgtttcaccattgctttaagaaacgtcattggt
aatgagtgtaaaatttctgcaaaccttaattcactgaaagaaacgggtttcatcaattac
tatgaacctcaacgttttggaacgcgacacataccgactcatttcattggaaagcaactg
cttctagggagatggaaagaggccataaatttaattttggatcctggaaatttaaatggc
aatcttccatttaaacccgacgttacaagggctctcatcgagtacaaatcgtcaaatgat
gctcaaaaagcttttgctaaaataacgggaaagtgcaaaacaattgaggcaaaactcctg
ttaagcttatcgaaatgcgagggagatgtcgtaggtgcattgaatactatatctcgtaac
agtcgagtcatgtatatgcgcgcctatcaatgttttatctggaataccatcgcttctaag
cgtcttgccacctttggttcgcaaccgataataggcgatttagtatacgcaccaaataat
aacgaaaatgccaaacaaaaaaacaaaaacttagaaatggagaagaaatcattgattgaa
atggtaggcgatagagatgattgtggaaagaatgggcaaggcaaccaccggaaagtcatc
ttcatcgacgaaagcaacattcgtaagtacacagtccacgatgttgtcttaccgttacct
ggatgccacatcgtttatccggcaaaccaaattgccgtttggtaccaagaactgttacag
gcagatgggttgacggaagaggatttcagtcgaagcttcaagatgtttgatcttagtggc
atgtatcgatacatggtttcaaagcccttcgatgtgaaatggaaattcgtgcattatgat
gatcccaacgctacactcattctgtccgatagggaccgattgaaaaaaaaaaggcagctt
caccctgccatacaaggtagtaaataccgcggacttgtgctcgaattcagtctctcggcc
ttcgcttttgcgagcatggtcattagagagatcaccaagatggacatgactacagaattt
cacgcgaactttaaaaaagccaaaaaaataatcaaaaccaagagagccaatcgtcggtgg
aaggtgagagatgtcaaatcctgtttgaatcatgtaaaagccaagagtctccaaaaacac
cccttgagatga
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