Daphnia magna (water flea): 116931670
Help
Entry
116931670 CDS
T07514
Name
(RefSeq) uncharacterized protein LOC116931670 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116931670
Enzymes [BR:
dmk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
116931670
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116931670
Prokaryotic type
116931670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
BET
Motif
Other DBs
NCBI-GeneID:
116931670
NCBI-ProteinID:
XP_032795169
LinkDB
All DBs
Position
LG1:2552808..2557577
Genome browser
AA seq
590 aa
AA seq
DB search
MEDQVGIQEYAQRGKGFSAALKKLYSDCQVIRFSIVLSKVIGDENLIKVNLDSFKTNGFI
NYYETQYFRTRAHLVGKQLLLSQWQRAIDLILEEFQSQQKFNQMETELRSFMKKDATDLV
GALNTIPFSMRLTYIRAYQSFIWNTAVSKRIAAFGMKPILGDLVNALGIDDDSCDLGLQS
FEKIDNYSSNSSNKNDCVQCKFIFIDKNNIHNYTIDDVVLPLPGYDITYPINEVAEWYRN
LLLVDELTEMDFKREAKKYSLKTTYRRLISKPSDLSWKFVPSNSSSQRHFPIVLNQVGKT
ELFNAVVEDSGKPNTESSEEEMKLSQVDTSAISQPKKQNSSTFKSVLLASAATGKRKPIL
SPPAGFEMKYEDDTKPMSYEEKIQLSVGIQLLPSDKLARVVHIFRSLEQVDGPIPEEVVV
DLDKLKLSTLRVLQLFMASDPTTKFCKTYEARQLNKGKNKRELADTLREVPKADSRNKVC
SIVTKQVADVGIGIASNAAMLSNSKAVECRLDGNFDLVVEFNILPSSYVTMAVREIMKMD
VSAVFGGGTEINSNEEIPQRNHQRRVSSLNKSLVKSRRPVSHHRNLGKND
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaagttggaatacaagaatatgcccagagaggaaaaggattttcagctgct
ttgaagaaattgtactcagactgccaggtcattcgtttcagcattgtgttgagcaaggtt
atcggtgacgagaatttaattaaagttaatctcgattcattcaaaacaaatggtttcata
aattactatgaaactcagtattttagaacacgggcacatttggttggcaaacagctacta
ttgagccaatggcagcgagccatcgatttaattttagaagaatttcaaagtcagcagaaa
ttcaatcaaatggaaactgaacttcgctcttttatgaagaaagacgctacagatctcgtt
ggtgcattaaacaccattcctttttcaatgcgacttacatatattcgcgcctaccaaagt
ttcatctggaacactgccgtttccaagcgaattgctgcgttcggcatgaagccgatcctg
ggggatttagtcaatgctctggggatagacgatgatagttgtgatttgggacttcaaagc
tttgagaaaattgataactatagcagcaactctagcaacaaaaatgattgtgtgcaatgc
aaattcattttcattgacaaaaacaacatccataactatacaatcgacgatgttgtgtta
ccacttccgggttacgatataacctatccgatcaacgaagttgccgaatggtacagaaat
cttttactggtggatgagctgaccgaaatggatttcaaaagagaggccaagaagtatagc
ctcaaaacaacataccgtcgcctgatttcaaaaccatcagatttgagttggaaattcgta
ccctcgaacagttcttcgcaacgacatttcccaatcgtcttgaatcaagtgggaaagaca
gaattatttaatgccgtagtagaagacagcggtaaacctaatactgaatcttcggaggaa
gaaatgaaactatctcaggttgacacgagtgctattagtcagccgaagaagcagaattct
tcgacgttcaagtcggtgcttttagcgtctgcagcaacgggcaagagaaagcctatttta
tctccgccagctggtttcgaaatgaaatacgaggacgacaccaaaccgatgtcatatgaa
gaaaaaatacaacttagtgttggcatccaactgcttccaagtgataaacttgcgcgggtt
gttcacatttttcggtcgttggagcaagtagacggaccgattccagaagaagtggtagta
gatttagataaactaaaactttcaacgctcagagtactgcaattatttatggcttctgac
ccaaccaccaaattttgtaaaacatacgaagcaagacaactgaacaaagggaaaaacaaa
cgagagttggcggacactttgcgggaggtaccaaaagcagattcacgcaataaggtctgc
agcatagttaccaaacaagtcgcagacgttggaatcggaattgcatccaatgctgcaatg
ctatcaaattctaaagcagttgaatgtcgtttagatggcaattttgatcttgttgtcgaa
ttcaacatactgccttcgtcgtacgtcacaatggccgtcagagagatcatgaaaatggat
gtgagtgccgtgtttggtggtgggactgaaatcaacagcaacgaagaaattcctcagaga
aaccaccaaagaagggtttcgagtttgaacaaatcgttagtgaaatcacgtcgtccagtg
agtcaccaccgaaacttaggaaaaaacgattga
DBGET
integrated database retrieval system
