Daphnia magna (water flea): 116931824
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Entry
116931824 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC116931824
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04137
Mitophagy - animal
dmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116931824
04137 Mitophagy - animal
116931824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116931824
03029 Mitochondrial biogenesis [BR:
dmk03029
]
116931824
Membrane trafficking [BR:
dmk04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
116931824
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
116931824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
New_glue
WD40_MABP1-WDR62_2nd
ZapB
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
Mala_s_1-like
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
116931824
NCBI-ProteinID:
XP_032795351
LinkDB
All DBs
Position
LG10:9657872..9663787
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AA seq
1374 aa
AA seq
DB search
MDGFPLPVFNIESEDEEDHEVVEVQDVKSTRCDHLHKLLNDRSLSLPTHNPNTILKKLEA
IAEENLLKKDLKETCCTLPGNPRSTFLMVFSPDGSKVASSHGDHNINVTDLRTSKCISTL
TGHPRTPWCIAFHPHRNDILASGCLGGQVRVWDLSGGSEMWSVTATEVTTVIASLAFHPS
ERLLVVATNSTLYFWDWNIPQPFAKCSTANEKQKLRYVSFDPLGNWLLTGISNTFGTSAS
FAPGTTSSLTGGPLTLGGPGQVTHQINYRMERNEQERERNLQSRYQTLLDQYERLRVRYQ
ELRHRAAELELNASSSQSTSTGTVASFNMNSEVPSPAPSVSTINVPVADQSTINSSRTSP
PPPTGDTSLLNTSSSSDRFWRTLMNAAENLRALSNIGRTLNTSQRQAGGPAEGSSRPSGP
SLDQDARMRIQLLSRHIENMQRICRSHLEMTRHRRQVYRLQQIRRILEDLREQIRYLQVC
VRDSLDLVSRLRTSPAGSSTPLSNQRPNSSHRESAAFANNREAAGSSSTGSNHEGDLQFT
SNGRMVMGSRAYSPIQCRRFTNYLFGRLRRIGLQHHRDNSRLRHSFVAGREARYPIRRLG
LYRGDSSSLSGNPVEQIDPQPGPSRGYPMGTDFEFDEVMPNLERGLGSGSSSNSFGWRRS
RFSRMTRRSNNINVVHPTHRSNSLLHTRHSGIQRRKPSLLSRIFHGRTLQNQIRSLATYH
STLESTTPVNLESGRPSDQSLRPLMERLESHFRLQRQTMGILAQLNEAAVANGIGSNVEG
NNPTPAAGAPGENSVDGGGVPTASFSDSGVSSRGGPWASNVLHSIRHFRARRDAFERARS
FESRLSSSGSVDRFQPPRRMDSNLNIGIPPRFRPSRPFEDEDSSDTDTDVAAESANPAAN
RWRQSSPIRSPRGVEQRMRLLWREYLSQVVHVQLNSMGESNNGNTSQQPGAGTAQDSGDN
DQERTRYRLWLSTMVESLTSFFSQHAINSSDSTDAPPTPSINTTTNRPLPGTPLPSRPGS
SSAAGQAQAFPYVSRFSNAMRDEGFMPATEEGPTSPVMASRSTAGPHHAPPPWRVFPRVG
HGMGGVGGSAGVSFGIGGADQGPGQQRWNLRRNAESQVSLSAHLTYRIQAWDFCAKDRLI
PDIRDPYANIVVPESKIHNDASVDVSADGRFLVTLVPCTSLTGALISLHSLEPSRLGLCL
AQVNVDQFVVSVSISPTCRHLLLGLASSRALSVTSRDHALPTLWAQVYQIPIKVFQAQRN
GPSAITAAAATATATATATATATTTATATATASSTSGAVHSVVGDLTVDHHQSSRQLLEK
KQSIPPPKGSLLHVRDLSQTADVGLTSLNCIRWIPTAGQGFVLGTNKGHLKVIG
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggacggctttccattgccagtcttcaacatcgaatcagaagatgaagaagatcatgaa
gtagttgaagtccaagatgtcaaaagcactagatgtgatcatttgcacaagctgttgaat
gataggagcctttcactacctactcacaatcccaatactattctgaaaaaacttgaagcc
atagctgaagaaaatcttctgaaaaaggatctgaaagaaacatgctgcactctgcctgga
aatccaagatcaaccttcttgatggttttcagtccagatggctccaaagttgcttcatca
catggtgaccacaacatcaatgtgacagacctaaggacaagcaagtgcatctccaccctg
actgggcatcctcgcacaccgtggtgcattgccttccatccccatcgaaatgacattctt
gcatcaggatgtcttggagggcaagttcgtgtttgggatttgtctggaggaagtgaaatg
tggtctgttacagctacagaagtgacaacagtgatagcgtccttggcttttcatcctagt
gaaaggctgctcgtagttgctactaatagtacactgtatttctgggattggaatattccc
caaccttttgcaaaatgcagcacagcgaatgagaagcaaaaactaagatatgttagtttc
gatccattgggcaattggttactcacaggaatatcgaatacttttggcacgtccgcttct
ttcgctcctgggacgacctcgtctctgacggggggtcctttgacattaggaggcccgggt
caagtaactcatcaaattaattacagaatggaacgaaatgaacaggaacgggaacgtaac
cttcagagtcgttatcaaacattgctcgaccagtacgaaagattgagggttcgctatcag
gaattacgtcatcgcgcagcagagctagaactgaacgccagttccagtcagagtactagc
accggaacggtagcttcctttaacatgaatagcgaagttccatcaccggctccttccgtt
tctaccattaatgttcccgtggctgaccaatcgacgattaacagctccaggactagtcca
ccccctccaacaggtgatacttcgttattgaacacgtcttcatcgagcgatcgattctgg
cgtacgctgatgaatgcagccgaaaatctacgagccctcagcaatatcggtcgaacttta
aacaccagtcaacggcaggcaggtggtccagcagaaggttcttcgagaccgagtggaccc
tcgctagaccaagatgctcgtatgagaattcagctcctcagccgacatattgagaatatg
caacgcatctgccgttctcatcttgaaatgactcgtcatcgtcgccaagtttatcgattg
cagcaaatccgtcgcattctggaagacctaagggaacaaattcgttaccttcaggtttgc
gtcagggatagtctagaccttgtgtctcgtctgcggacgagtccagcaggaagcagcacg
cccttgtcaaaccaacgcccaaattctagtcatcgtgaatctgctgcctttgccaataat
cgtgaggctgctggcagcagtagcaccggctcaaatcatgaaggtgatttacagttcact
agcaacggcagaatggttatgggatcccgggcgtattctccaattcaatgtcgacgtttc
accaattatttgttcggtcgtttacggcgaatcggactccaacatcatcgagataattcg
agactacgtcatagttttgtggcgggacgggaagccagatatccgatccgtaggttgggt
ctttatcgtggcgattcgagctctttgtctggcaatcccgtcgaacagattgatccccag
ccaggaccttcacgtggttatccgatgggaaccgattttgaatttgacgaagtgatgccc
aatctggaacgaggattgggatcgggatcgagcagcaattcgtttggctggaggagatcc
cgattctcgcggatgacgcggcgaagcaacaacattaatgtggtacatccaacgcacaga
agcaattcccttcttcatactcgtcattcaggtatccagcgacgcaaaccttcacttctt
agtcgcattttccacggacgtacgctccaaaatcagatcagatctttggcgacttatcac
tcgacattggaatccaccacgccagtgaatctggaatctggacgtcctagcgatcagtcc
ttgcgtcccttgatggaacgtctggaatcgcattttaggcttcaacgtcagaccatgggc
atattagcccagctgaatgaggcggccgtagctaacggaattggcagcaacgtcgaaggg
aacaacccgactccagcagcaggagcacctggagagaattcggttgatggtggtggtgtg
cccacggccagttttagtgacagtggcgtatcttctcgcggcgggccgtgggcctcgaat
gtccttcacagtatccgccattttcgagcaagaagggacgcctttgaaagggcacgttcc
ttcgaatcgagattgtcttccagcggcagtgtggatcgttttcaaccgccacgacgaatg
gatagcaacctcaacatcggaattccgcctcgtttccgcccatcacgtccgtttgaagat
gaagacagttccgatactgacactgacgtggccgcagagtcggcgaatccagcagccaat
cgttggcgtcaatccagtccaatccgttcgccacgaggcgtagagcagcgaatgagactc
ttgtggagggaatatttgtcgcaagttgtccacgtgcaactgaacagcatgggtgaaagc
aataacggtaacaccagccagcaacctggcgcaggaacagcgcaggacagcggcgataac
gatcaagaacggacacgctatcgtttatggctctcgactatggtcgagagtctaacgagt
ttcttttcccagcacgcaatcaattcctctgattcgaccgatgcacctcctaccccgtcg
ataaacacgacgaccaatagaccattacctggaactcctctaccatctcgacctggctcg
tcatcagctgcgggtcaggcccaagcgttcccttacgtttctcgtttctccaacgccatg
agagacgaaggattcatgccggccacagaagaaggtccgacgtctccggttatggcttcg
cgttctactgctggtccacaccatgctcctccgccttggagagtgttcccgcgtgtcggt
cacggtatgggtggcgtaggtggatcggctggagtttcttttggtatcggtggagcggat
caaggcccaggacagcaacgatggaatctccgccgaaatgcggaatcgcaagtgtcgttg
agcgcccatttaacctaccgcatccaagcttgggatttttgcgccaaagacagattgatc
cccgacatccgcgatccctatgccaacattgttgttcccgaaagtaagatccataatgac
gcgagtgttgatgtctctgccgacggccgtttccttgttaccctcgtgccctgtacttct
ctcactggagctctcattagtcttcatagtctagaaccatctcgtctgggtttgtgcctg
gcgcaagtgaacgttgaccagtttgttgtttcggtcagcatttcaccaacttgtcgtcat
cttttgctgggcctggctagttcccgtgctctgtctgttaccagtcgcgatcacgctctt
cctacgctctgggcccaggtgtatcaaattcctatcaaagtctttcaggcacagagaaat
ggcccgtcagctattactgctgctgctgcaactgcaactgcaactgctactgcaactgct
actgctactactactgctactgcaactgcaactgctagctcaactagtggcgctgttcat
agcgttgttggcgacttgacagttgatcatcatcaaagtagtcgtcaactgttggagaaa
aaacagagcattccaccaccgaaaggtagtctgctccacgtacgtgatttaagtcaaacg
gctgatgttggattgaccagtctcaactgtattcgctggattcctactgctggacaagga
tttgtattgggcactaataagggtcatctcaaagtgattggctga
DBGET
integrated database retrieval system
