Daphnia magna (water flea): 116931836
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Entry
116931836 CDS
T07514
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116931836
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116931836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
116931836
NCBI-ProteinID:
XP_032795373
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Position
LG10:complement(1949527..1954673)
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AA seq
1266 aa
AA seq
DB search
MRNLNLIDKKAASCSFLKDCCAATIERNLMFFANQNELCKLDVDQPNAEDSVEVLGPLDV
GSVLDLKYLPEEDVLAIVAKIGSVSVYNLSSSEFDVVGDVAGGISGCCWSPDMETLVIIS
ETGNVLMMSRTWDVIQEAPLFQQDFGEAKFVSVGWGSKETQFHGSEGKDARSKKQIDCSL
ADWDDRATRIVWRADGLFFAVNAVEPNTGHRLIRVFNREGFLQSTSEPVSQLCQSLSWRS
SGASGLITSTVSLVQQGKQQVAFFEKNGLRHGEFDFPVGQQVLESYWNGDSTILAMIIRF
DQDVYGLQLWTMANYHWYMKHFCPFKKGLRPLWVMWDVIETNRLHIIVSNGTYVMTDYQP
IVTSSKDLTSSDPACIAVVDNCKLKITFLRESIVPPPMCGWEIEFSSSIHSVDLLSSFSS
RLSVLTHSGLVHFFRLTDREIEEKLCHPDVKIVCKEGGHFRPVLDFTASLSLPVNYQLYH
FRLVNPSTIVSSALNQLLVLELNETIFTIKDTITLDTRIGGIEVLRRQQNTVLIHLVDGK
LLELHTDDMKISDSVVFPEFCCRIEWIDGHVVGLAASGRLYVDGKEILSAVSSFVAHSHF
LLVTSLQKHRLLCLPLSGLSNPNLAITERAIERGAKLVHAVAMETTVILQMPRGNLEAIH
PRALSLNIMKSLIDKQSYSDAFVLMKKQRINLNLLYDHSPSAFLEHCLQFVEQVSCVDVA
NLNLFLGELQDEDFTTTMYQSHYENKSTPKDNGKVNTVCSRLREVMIEKDSLKYLLPIIT
SYIKQAMVDQALKRVQVLTEESLKDQALKYMAVLVDGEQLYKEALATYDLQLTLMVAHRS
QKDPKEYLAFLNDLKAMADDNERRFTIDNSLKCYDSAIRHLCRCRPVRTEQIIAYMKLHR
TYVSVVDELCTVLPKDEVKTALQAAACLQAEILASRDNHEEAGYLYQRVEAYDLALHSFE
QCGMWANCLSLASKLQLNEVETKSLVSKLVTRLRSSKKHGDAAQLAEYHLGDYQLAGQCL
IDGLFFREAWALAYRHDIVNWAETTLKNELNEAFQLIEAKLEQVEQECCKYSQRLSVVRQ
DLLYKRDHPPAETDHGDLYSETGSSIFTHSTGTSGRTFRSSKNRRKQERKKLRLKEGSPF
EDMAIINELHVLYSSISTVLQDVGRLLRGELIISKDWSRAKCLQNKTESLLRLMEEKKKD
IWNFSLNPKNQESDKNFGPSATTEMIISQVNQEKEEFFSTRYLELDIKIRSQPDSPDTTW
KLDSLK
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatttaaatttaattgataagaaggcagcatcgtgctccttcttaaaagactgt
tgtgcagcaaccatagaaagaaatttgatgttttttgccaaccagaatgaactgtgcaaa
ttggatgtcgatcagccaaatgcggaagacagtgttgaggtactaggacctttagatgtt
ggaagtgttttggatttaaaatatttaccagaagaggatgtgctagcaatagttgcaaaa
ataggaagtgtttctgtttacaacctaagctcatcagagtttgacgttgtaggtgatgtt
gcaggaggaatttctgggtgttgttggagtccagatatggaaacacttgttattatttct
gaaacaggaaatgtacttatgatgagccgtacatgggatgttattcaggaggcacctctt
tttcaacaggactttggtgaagctaagtttgtttcagttggatggggttctaaggaaacc
cagtttcacgggtcagaaggaaaagatgcacgaagtaaaaagcagatcgattgctcttta
gctgattgggacgatagagcaacccgaatcgtttggcgagctgatggacttttctttgca
gttaatgcagttgaaccaaatacaggccatcgtttaataagggtattcaatagagagggc
tttttacagtcgacgagcgaacctgttagtcaattgtgccagagcctctcatggcgctca
tctggagccagtggtctcattaccagcactgtttctcttgtgcaacagggaaaacaacaa
gtggcgttcttcgaaaaaaatggactacgtcacggggagttcgactttcccgtcgggcaa
caagttttggagtcttattggaacggtgactccacgatcttagcaatgataatacgcttc
gaccaagatgtttatggtcttcagctttggacaatggctaattatcattggtacatgaag
catttttgtccgtttaaaaaaggactccggccactgtgggttatgtgggacgtcattgaa
acaaataggcttcatattattgtttccaatggcacgtatgtcatgaccgattatcagccc
atcgtaacatccagcaaagacctgacgtcaagtgatcctgcctgtattgctgtcgttgac
aactgcaaactgaagattaccttcctccgcgagtcaatcgtcccgccacccatgtgtggc
tgggaaattgagttttcatcgtctattcattccgttgatttgctttccagtttttcaagc
cgcctcagtgtgttgactcacagtggtttggtacactttttccggcttactgatcgcgaa
attgaagagaagttgtgtcatcctgacgttaaaattgtctgcaaagaaggaggacatttc
cgacctgttttggatttcacagcctcattaagcttacctgtcaactaccaattataccat
tttcggttggtaaatccttccacaatagtttcgtctgctttaaaccagttactggtctta
gaactaaacgaaaccatcttcacaatcaaagacacaattactttagatacgagaattggg
ggaattgaagtgctacgcagacagcaaaatacggtgttgatccacctagttgacggcaaa
cttttagaactccacaccgatgacatgaaaatttctgattctgtcgtgtttcctgaattt
tgttgccgaattgagtggatcgatggtcatgtagttggtctggctgcaagcggacgctta
tacgttgacgggaaggagatcttgtcagccgttagctccttcgtcgcgcattcacatttc
ctgctggtgacttcactgcaaaagcataggctgctttgtctacctctttctggattatcc
aatcctaacctagcaataaccgaaagagccattgaaagaggagctaaattggtgcatgca
gtcgcaatggagactaccgttattttgcaaatgccacgtggcaacctggaagcaattcat
cctcgagccctttccttaaacatcatgaaatcgttaattgacaagcaatcttattcggat
gcattcgtcttaatgaagaagcaacgaatcaatttaaacttgttgtatgatcatagcccc
agtgcgtttctagaacactgtttgcagtttgtcgagcaagttagctgcgtggatgtggcc
aacctcaatctcttcctaggagaactacaggatgaagatttcactacaacaatgtaccaa
agccattatgaaaacaaatcgacgccaaaagataacggaaaagtgaatacagtttgcagc
agactaagagaggttatgatcgaaaaagatagtctaaagtatctccttcctattatcact
tcatatataaagcaagcgatggtagaccaagctttgaaaagggttcaagtcctcacagaa
gaatctttgaaagatcaagctctcaaatacatggccgtcttggtcgatggagagcaactg
tacaaagaagcattggccacctatgacttgcagttgacgctaatggtagctcatcgtagc
caaaaggatcccaaggagtatctagcatttttgaacgatttgaaagccatggccgatgac
aatgaacgacgttttaccatcgacaactctttaaagtgttacgattcagccatccgtcac
ttatgtcgctgtcgacccgtcagaaccgaacagatcatcgcttatatgaaacttcacagg
acatacgtttccgtcgtagatgaactgtgcactgtgttgcctaaagatgaagtcaaaaca
gctttacaagcggcagcttgcctgcaagctgaaatcctggcatccagggataatcacgaa
gaagccggttatctctaccagcgagtggaggcctacgatttggcccttcattcttttgaa
cagtgtggaatgtgggccaattgtttatcgcttgcatctaaacttcaattaaatgaggtg
gagacgaagagtttggtatccaaactagttacgcgtctacgctcttcaaaaaaacatggt
gatgccgcacaattagctgaatatcatttgggagattatcaactagctgggcaatgttta
attgatggtctctttttcagagaagcttgggctctagcctatagacatgatatagtaaat
tgggcagagacaacactgaagaacgagttgaatgaagcgttccagttgatagaagctaaa
ttggagcaggtggaacaagagtgctgcaaatattctcagcgtttatccgtcgtccgacag
gatctgctgtacaagcgtgatcatccacctgctgaaacagatcatggggacctttactcg
gaaacggggagtagcattttcacgcactctaccggcacgtcagggaggacgtttcgatcc
tccaaaaatcgtcgaaagcaggagagaaagaaattgcgactcaaagaaggaagtccattt
gaagatatggccattatcaatgagctacacgtactctactcatcaatctctactgtcctc
caggacgtgggtcgccttctaagaggagagttgatcatttcaaaagattggagccgagcc
aagtgccttcaaaataaaactgagtcgctgctaagactaatggaggaaaaaaagaaagac
atttggaacttttctttgaacccaaaaaatcaagagagtgacaagaattttgggccatca
gctactactgaaatgatcatctcacaagtaaatcaagaaaaagaagaattcttttccaca
cgttacttggaacttgatatcaaaatacgcagtcaacctgattcaccagatacgacttgg
aaacttgatagtcttaaataa
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integrated database retrieval system
