Daphnia magna (water flea): 116932009
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Entry
116932009 CDS
T07514
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04136
Autophagy - other
dmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116932009
04136 Autophagy - other
116932009
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116932009
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116932009
03029 Mitochondrial biogenesis [BR:
dmk03029
]
116932009
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
116932009
Membrane trafficking [BR:
dmk04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116932009
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116932009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
DUF2039
DUF2397
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
116932009
NCBI-ProteinID:
XP_032795586
LinkDB
All DBs
Position
LG10:7015298..7017331
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AA seq
390 aa
AA seq
DB search
MQCVQIAISFFLLFFKSLLENTQKMLEACEAFVTYESGIILDRQGFEVNDDPVWILGQKY
DTRTKLDELHTDIKSRLLLTYRRNFTAIGDSGMTTDRGWGCMLRCGQMVVAQALVKQHLG
RGPFWPLKNDQNKAETYKKILRLFEDKKTAVYSIHQLAQMGVSEGKEIGQWFGPNTVAQV
LKKLSAYDEWSSLKIHVAMDNAVVIEEIEELCHTKNPDAETTMWNPLLLVVPLRLGLLSI
NPIYIDSLKACLQMPQSIGMIGGKPSQALYFIGYVGDDVVFLDPHLTQNAIEFDDEEFED
SSYHPTTSARISFHSMDPSLAVCFSCTTHSEWKNLLQQFKIMTEAGKKQNLFEVCTQRQA
EWHPSSMDLADEAIALADSADSEEDFEILG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgtacaaatagcaattagtttttttctcctcttttttaaatctttgcttgag
aacacacaaaaaatgcttgaagcctgtgaagctttcgttacatatgagagtggcatcatt
ctcgatcgccagggattcgaagttaatgacgaccctgtatggatactcggtcaaaaatac
gacacaagaactaagttggatgaacttcatacagatataaaatccagattgttgttaaca
tatagaagaaattttactgcaattggagatagcggtatgaccactgatcgtggatggggt
tgcatgcttcgttgtggtcagatggtggtagcacaggcactggtgaagcagcatttagga
agaggcccattctggccattaaaaaatgaccaaaacaaagctgaaacatacaagaaaatt
ttaaggctttttgaagataaaaaaactgcagtgtactctattcaccaattagctcaaatg
ggagtcagtgaaggaaaagaaatagggcaatggtttggcccaaacactgttgcacaggtt
ttgaagaaattgtctgcttatgatgaatggtcatcactgaaaatccatgttgccatggat
aatgctgtggtgattgaagaaatagaagagttgtgtcatactaagaacccagatgctgag
acaactatgtggaatcctcttttacttgtggtcccgctacgactgggcttgctgagcatc
aatccaatttacatagacagtctgaaggcttgtctccaaatgccccaatcgattggaatg
atcggaggaaagccaagtcaggcgctttatttcataggctacgttggagatgatgtcgtt
tttctggaccctcatcttacccaaaatgcaattgaatttgatgacgaagaattcgaggat
tcctcttatcatcctacgacgagtgcgcggatctcttttcactcgatggatccctcgtta
gcggtgtgtttttcgtgcacgacgcattctgaatggaagaacctgcttcaacaatttaag
atcatgactgaggcggggaagaagcaaaacctattcgaagtatgcacccaacggcaggcc
gagtggcatccatccagcatggacttagcggatgaagccattgctcttgcagatagcgca
gattcggaggaagacttcgaaattttgggttga
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