Daphnia magna (water flea): 116932135
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Entry
116932135 CDS
T07514
Name
(RefSeq) cytoplasmic FMR1-interacting protein isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116932135
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116932135
Factors involved in mRNA localization
Other mRNA localization factors
116932135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
116932135
NCBI-ProteinID:
XP_032795768
LinkDB
All DBs
Position
LG10:8239814..8245890
Genome browser
AA seq
1309 aa
AA seq
DB search
MATEKVTLADALSNVEVLDELPLPDQQPCIEAQACSVTYQANFDTNFEDRTAFVTGVAKY
IEEATVHASLNDMLREGQEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVQVLAPEV
NKLLNFMYFQRKAIERFSAEVKRLSHAEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKS
SVKNDYSAYRRAAQFLKVMTDQQALQESQNLSMFLATQNKIRDSLKEALEKIPSYEELLA
DVINLAVHMLETRMYLLPEEKHMLVKVLGFGLFLMDSEICQINISKLDHKKRIRLDKIDK
IFKNLEVVPLFGDMQIAPFNYIKRSKTYDASRWPLCGATLPSPQADLMVHLPQIREDHVK
FTSELARYSNEVTTTYKETRSPEEMKEMMELALRGLQLLSEWTSIVTELYSWKLLHPTDH
HQNKDCPAEAEEYERATRYNYTEEEKFALIEIIAMIKGLQVLMARMETVFADAIRRHVYA
ELQDFVQLSLREPLRKAIKNKKDLIRSIIVSVRETCADWIRGTEPQDDPATKGKKDPDNG
FDIQVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGSYLMAIDQFHKNSFFW
NYLLNFSETLQQSCDLSQLWYREFYLEMTMGKRIQKCCVKHQHNEECKDVVTLEKRIQFP
IDMSMPWILTDHILRTKEPSMMECVLFPLDLYNDSAHYALTVFRKQFLYDEVEAEVNLCF
DQFVYKLSEQIFAYYKHLAGSIMLDKRFRAECAALGTRFTYPPANRYETLMKQRHVQLLG
RSIDLNRLISQRVNAALLKALELSVARFEGGDITGVVELSGLLEVNRLTHKLLSRNLAMD
DFDAMWREANHNVLAPYGRVTLHVFWELNYDFLPTYCYNAATGRFIKCRDLLFSQPVQRD
KPPQTPYHYLWGSKALNIANGNIFNQYSGFVGAPHFKAISNLLGYQGIAVVMEEILKIIK
SLVQGNILQFTKTLMQAMPKQCKMPRYDYGSTGVLGYYQAQLNDIVQYPDARTELFHNFR
EFGNALIFCLLIEQAMSQEEVCDLLQAAPFQNILPRPFVKEGEKLEAKQKKLENKYAALQ
IVANIEKLGTAKQTLIAREGDLLTRERLCCGLSVFEMVLNRIRTFLDDPIWTGPAPVNGV
LTVDECTEFHRLWSALQFVYCIPVGENEFTVEQLFGEGLHWAGCTMIALLGQQRRFEALD
FCYHILRVQRVDNKDETVKGIQLKRLVDRIRRFQVLNSQVFATLNKYLKTSSGDVDSQPV
EHVRCFQPPIHHSLAANQGHYYRPDQLLRQSMNIANTSGIIANMTIEQH
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaaaaagtgaccctcgccgacgcgttgtccaatgttgaagtgcttgatgaa
ttgccactgccagatcaacaaccatgcattgaagcccaggcttgctctgtaacttaccaa
gccaactttgatacaaattttgaagatagaactgcgtttgtgactggagtagcgaagtac
atagaagaagctactgttcatgcaagcctgaatgatatgcttcgagaaggccaagagcat
gcagtgatgctatatacatggagatgctgttccagggcaattcctcagcctaaatcaaat
gaacagcctaacagagttgaaatatatgaaaagactgttcaggttttggcaccagaagtt
aacaaattgttgaattttatgtattttcaacgaaaagcaattgagcgctttagtgccgaa
gttaaacgtctatcccatgctgagaaacgtaaggacttcgtgtcagaagcctacttgctc
actttgggaaaattcattaatatgtttgctgttctggatgaactgaagaacatgaaatct
agtgtaaaaaacgattactctgcatatcgcagagctgcccagttccttaaggtgatgaca
gatcagcaggcgcttcaagaatcgcaaaacctgtcgatgtttttagccacccagaacaaa
atccgtgactcacttaaagaagcccttgaaaaaattccatcttatgaggagctgctggct
gatgtcatcaatttagcagttcacatgctcgaaacgcgcatgtatcttctaccggaagag
aaacatatgctagtcaaggttctgggcttcggattgttcctaatggattcagaaatatgc
cagataaacatttccaagttggatcacaaaaagcgtattagactcgacaagatcgacaaa
atctttaaaaatctggaagttgtcccgctctttggtgacatgcaaattgccccatttaac
tatataaagcgttcaaaaacgtatgatgcatcccgatggcctttgtgtggcgcaactcta
ccttcccctcaagctgatttaatggttcacttaccacagatccgtgaagatcacgtaaaa
ttcactagcgaactagcacgttatagtaacgaagtcactactacgtacaaagaaacgcgt
tccccagaggagatgaaagagatgatggaacttgctcttcgtgggttacagcttttgtct
gaatggacaagtatagttacagagctttattcttggaaacttttacaccctacagaccat
catcaaaacaaagactgccctgctgaagcagaagaatacgaaagggctacgcgatataac
tacacggaagaggaaaaatttgcgctcatcgagatcattgccatgataaagggattacaa
gttcttatggcaagaatggagacagtattcgcggatgctatacgccgacatgtctatgcc
gaattgcaagattttgttcaacttagtttgcgtgaacccctacgaaaggcaataaagaac
aagaaagacttgattcgcagtataatagtttcagtacgagaaacttgtgctgattggatt
cgaggcacagagccacaagacgatccagctaccaaaggcaaaaaagatcctgataatgga
tttgatattcaggttccacgtaggaatgttggcccatcttcgacccaactctacatggtc
cgaaccatgctggagtcgctaatagcggataaatctggtggtaaacgtacactacgcaaa
gacatcgatggatcttacctcatggcgattgaccaattccataagaattcatttttctgg
aattatctgcttaatttcagcgaaaccctacagcaatcgtgtgatctttcacaactatgg
taccgagagttctatctcgaaatgacaatgggcaaaagaattcagaaatgttgcgtgaag
caccaacacaacgaggaatgcaaagacgtggtcacgctggagaaaagaattcagtttccc
atcgacatgtcgatgccttggattctgacagatcatattctgcgtactaaggaaccttcc
atgatggagtgcgttcttttcccgcttgatctctacaacgattctgctcactatgcactg
actgttttccgtaaacagtttttgtatgacgaagttgaagctgaagttaatctgtgtttc
gatcagttcgtctacaaactcagcgaacaaattttcgcctactataagcatttagctgga
agcatcatgttagataaacgttttcgagctgaatgcgccgcattgggcacgcgctttacc
tacccgcctgccaaccgctacgagactttgatgaaacagcgccatgttcaactgttgggt
cgttcaattgatttgaatcgattgatatctcaaagagttaacgctgcgcttctcaaagcc
ctggagttatctgtcgcacgttttgaaggtggcgatatcactggcgtagtggaattaagt
ggtctcctagaagtgaatcgtctgactcataagttgttgagcagaaatttggcaatggac
gatttcgacgcaatgtggagggaagcaaatcataacgtcttggcgccgtatggccgtgtg
acgttgcatgtcttttgggagcttaactatgactttttgcccacttattgttacaatgcc
gccacgggtcgcttcataaagtgccgtgacttgcttttcagtcaacccgtccaacgagac
aaacctccccaaactccctatcattacctttggggaagtaaggcattgaatattgccaat
gggaacatcttcaatcagtattcaggattcgtaggggcaccacattttaaggctatctcc
aatcttctgggttatcagggaatcgctgtcgtcatggaggagattctcaagatcattaaa
tctctagtacagggcaacatactacagtttacgaagaccctgatgcaagcgatgccaaaa
caatgcaaaatgcctcgttacgattacgggtcgactggtgtcttaggatattatcaggca
caattgaacgacatagtgcaatatcctgatgcacgaacagagttatttcacaatttcagg
gagtttggaaacgctctgatattttgtctcttgatcgaacaagcaatgtcacaggaagaa
gtctgtgatctgcttcaggcagcgccttttcaaaatattctcccaagaccgttcgtcaaa
gaaggagaaaagttggaagctaagcagaaaaaattggagaacaagtacgcggctttgcaa
atagtcgcaaatattgaaaaattgggtacggccaagcagactttgattgcgcgagaagga
gatcttttaactagggaacgtctttgctgtggtctttcggtttttgaaatggtgcttaat
cgcatccgcacttttctggacgatcccatttggactggccctgctcctgtcaatggcgtg
ttaacggtcgacgagtgcacagaatttcatcgactctggtcagcgttgcaatttgtgtac
tgtattcctgttggtgagaacgaattcacagttgaacagcttttcggtgaaggccttcat
tgggccggatgcaccatgattgccttgttggggcaacagcgaagattcgaggcattggac
ttctgttatcatatcttacgtgtccagcgtgtcgacaataaggatgaaactgtcaaaggc
atccagctgaagcgattggtggatcgcatccgcagattccaagtcctgaactcacaagta
tttgccactctcaacaaatacttgaaaacaagttcgggtgatgtagattcgcagcctgtg
gaacatgtgcgttgtttccagcctcctatacaccactcgctagcagcgaaccagggtcac
tattatagacccgaccaacttcttcgacagtccatgaacatagccaacacttcaggtata
atcgcgaatatgacaatagaacagcattag
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