Daphnia magna (water flea): 116932303
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Entry
116932303 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmk03032
]
116932303
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116932303
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116932303
DNA replication proteins [BR:
dmk03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
116932303
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116932303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
116932303
NCBI-ProteinID:
XP_045036268
LinkDB
All DBs
Position
LG10:572122..576458
Genome browser
AA seq
1242 aa
AA seq
DB search
MAKYDDLLIDSKKTINKWEHEFQKTNGRKPSKDDFKVAPCEVTDAYKLYYKIKKKQELVK
NGEVSPESLPNNTIQVQNNEDGPIQEVSIKEPIKDNGSSVWGEHLNKQKPSQELTKSKEI
STPTTSSCNTYSKLTEKLMKGAKINIRTSLTRKLGKKSMSSPVIKLNDSLLNSSQLSEVC
ESEFKNSLLVNNEDEDPFPGEDPFPGTSKAKKEEDPELIPGFKPKIVQHQATQKQPFSLS
MARQRIATRQVDLQWLDGCLVEDGCSVPSKPEVFDDQDVIYSTDDEAPKPPKITTSAPQT
KLDPVTSPPVAQKRKYSEDQVPECSQKKPKIDESLILQENGFGHENCPSASEDNSADKPL
KYAKENSSTAAKRERLENKMASGTANQNFVKINLKKKVFARGKKTLTGGSYKRQQWKQRQ
NGGVGGGGGKGNYKFKMVTSCRRCGEIGHWAKNCMSEKLLSMEELKEQGDEEDLSFPTLE
EAMDKADEVTSKQKKKKEVVETDERGEDDLQLVELPKVKQVEPFCTPGEPVPPIVMQLLK
KFGHSSFRVGQEEAVMRILSGNSTLVVQSTGSGKSLCYQLPAMVYAQRSSCITIVVSPLV
SLMEDQVVNLPSFVKGVCLHSGQSEGVRQKTLQLLQSGAVQILLVSAESVISTGPYGLVT
LLRTCLPPVAFVCIDEAHCVSQWSHNFRPSYLRICKVLKEKMNIKTILGLTATAPKSTLR
SIADNLGVDYESGVIQGVLLPSNLYLTVSRDKDRDAALIQLLEGKRFADFNAIIIYCIRR
EECERLATLLRTYLKDPLKDLESKGAGRRRGISWSAEAYHAGLTAARRTSVQKQFMSGKM
KIVVATVAFGMGINKSDIRAIIHYNAPKNFENYVQEIGRAGRDGLPAHCHVFLNSEGRDL
QELRRFIYANSTDRHVLRKLMRKILPEPCQCRGEDGTGECKGHEVAMVIESTVQELDMPE
ENIATLLCQLESHPSRWVLEVGTKVYATCTVRCYGGLQQLKMAARESPALGAALALQKAD
TTAVRKFAVVDVARKIGWDSGAVKRQLKSLEWDRSAVAIGGKPRRSGILVEFSDLAFHLH
VRGDLSETEQDAALEFIHQRCLNREANEIQQLQRIHQALLSISHAQSSSCCEEVDETRSE
KLRSFIQDYFEEEAGTSQPVEEVVHCPENQEQHIRATIRSLILNYRDQTFTARSIARILH
GISSPCYPAEFWGKARQHWRAQLHQDFNLLVRMAAQELLALK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtatgatgatttattaatagacagcaaaaagacgattaacaagtgggaacat
gaatttcagaaaacaaacgggcggaaaccatctaaggacgatttcaaagttgccccgtgc
gaagttacagatgcgtacaagctttattacaaaatcaaaaagaaacaagaactagtcaag
aatggtgaagtatctccagagtcgttacctaataacacaatccaggtgcaaaataatgag
gatggccccatccaagaagtgtctattaaggaacctataaaagataatgggtcttctgta
tggggagaacatttaaacaaacaaaaaccttctcaggaattaaccaagtcaaaagaaatt
tccaccccgaccacctcctcctgcaacacttattcaaagttgacagagaagctgatgaaa
ggtgctaagattaacatcagaactagccttacccgtaaattgggcaagaaatccatgagc
tctcctgtaattaaattgaatgatagcctgctcaatagcagccagttgagtgaagtatgt
gaaagtgaatttaaaaacagtttgttggtgaacaatgaagatgaagatccttttcctggt
gaagatccttttcctggaacttccaaagccaaaaaggaagaggatccagagttaattcca
ggtttcaaaccaaagatcgtgcaacatcaagccacacagaagcaaccattcagcttgagc
atggcacgccaacgaatcgctaccagacaggtggatctccaatggttagacggctgctta
gtagaagatgggtgcagtgtaccaagtaaacccgaggtattcgacgaccaagacgtgatt
tattctacagatgatgaagcacctaaaccaccaaaaatcactacctccgcccctcaaact
aaattagacccagtaacttctccacctgtagcacaaaaacgcaaatattctgaagatcaa
gttcccgaatgcagccaaaagaaacccaaaattgatgaatcccttatcctccaagaaaac
ggatttggccatgaaaattgcccaagcgctagtgaagataatagcgcagataaacctttg
aaatacgccaaagaaaactcctcgacggctgcaaagcgcgaaagattagagaataaaatg
gcttcaggtacagcaaatcaaaatttcgtgaaaattaacctgaagaagaaagtgtttgcc
cgtggaaagaaaacgctcacggggggatcgtacaagaggcaacaatggaaacaaagacaa
aacggtggggtcggtggtggtggtggtaaaggcaattacaagttcaagatggttacatct
tgtcgccgttgcggtgagatcggacattgggccaaaaactgtatgagcgagaagctattg
tccatggaagagctgaaagaacaaggtgacgaggaagacctcagcttccccactctcgaa
gaggctatggacaaagcggatgaagtaacaagcaaacagaagaagaaaaaagaagtagtg
gaaactgatgagcgcggcgaagacgacctgcaactagtagagcttcctaaagtgaaacaa
gttgagccattttgcactcccggagaacctgtcccgcctattgtcatgcaattgctcaag
aaattcggccacagtagtttccgagtaggtcaagaagaagccgttatgcggattctttcg
ggcaactccacgttggttgttcaaagtactgggtccggtaaaagtttgtgctatcaacta
cctgccatggtatacgctcagcgttcgagctgtatcaccatcgttgtctcgccactcgtt
tccttaatggaggatcaagtcgtaaacctgccctccttcgtgaaaggtgtctgtcttcat
tctggccaatccgaaggcgtcagacaaaagactcttcaactgttgcaatcgggtgctgtt
caaatcctcctcgtgtcagccgaatctgtgatttcaactggcccttacggattggtaacg
cttttacgcacatgcctaccacctgtcgcttttgtttgcattgacgaagctcattgtgtt
tcgcaatggtctcacaattttcgcccgtcttaccttcgtatttgcaaggttctcaaagag
aaaatgaatatcaaaaccattctgggattgacggctactgctcctaaatctactctgaga
agcattgctgacaatttaggtgttgattatgaatcaggagtcatccaaggtgtattactg
cccagcaatctctatttgaccgtctcgcgtgacaaggatcgcgatgcagccttgatccaa
ctactggaaggcaagcggttcgctgattttaatgccatcatcatttattgcatcagacgc
gaagaatgcgaacggttagccactctactgcgaacttatttgaaagatcctctcaaggat
ttagagagtaaaggtgccggacggcgtcgaggcatttcgtggagcgccgaagcgtatcac
gctggactgacagcagctcgccgaacttctgttcagaaacaattcatgtctggcaagatg
aaaattgtcgtagccaccgtggcatttggaatgggtatcaacaagtcggacatcagagcc
atcatccactataacgctccgaagaattttgaaaattatgtccaggaaatcggtcgtgct
ggacgagatggtctgccggcccattgtcacgtctttctcaactcagaggggagggattta
caagagttgaggcgattcatttatgcaaattccacggatcgacacgttctaaggaaactg
atgagaaagattttaccagagccctgtcaatgccgtggagaagacggtacaggtgaatgc
aaaggtcacgaagtggccatggttattgaatcgactgtccaagagctggatatgccggaa
gagaacattgctacgctgctctgccaattggaatcgcatccgtctcgttgggtccttgaa
gtgggaactaaagtttatgcgacgtgcactgttcgatgctacggcggtctccagcagctt
aaaatggctgcaagagaaagcccggctctaggagcagcgcttgcacttcaaaaggcggac
actacagctgtcaggaagttcgctgtcgttgatgtagcccgcaaaataggttgggacagc
ggtgctgtcaaacgccaacttaaatcgcttgaatgggatcgctctgcggtagccattgga
ggtaaaccaagacgatcaggtattttagtggaattttcagatcttgcgttccatctccac
gtccggggagacctttccgagacagaacaagatgccgcgttagagttcatccaccagcgc
tgtctgaaccgtgaggccaatgaaattcaacagctgcagcgtattcatcaagctttgttg
agcatttctcatgctcagtcgtcttcgtgctgtgaggaagttgatgagaccaggagcgaa
aaattgcgtagttttatccaagactactttgaagaagaagctgggacctctcaacctgtt
gaagaagtcgttcactgtccggaaaaccaagagcaacatatacgggctaccattcgcagt
ttgatcctaaattatcgcgatcagacgttcactgcacgatctatcgctagaatcctacac
ggcatctccagtccttgttatccggcagagttttggggtaaagctcgtcagcactggaga
gcccagcttcatcaagattttaatcttctcgtccggatggctgcacaagaattgctagct
ctaaaataa
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