Daphnia magna (water flea): 116932316
Help
Entry
116932316 CDS
T07514
Name
(RefSeq) N-glycosylase/DNA lyase isoform X3
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116932316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116932316
Enzymes [BR:
dmk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
116932316
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116932316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HTH_48
Motif
Other DBs
NCBI-GeneID:
116932316
NCBI-ProteinID:
XP_032795975
LinkDB
All DBs
Position
LG10:complement(229661..231516)
Genome browser
AA seq
349 aa
AA seq
DB search
MAASPIMRIPCKVAELSLDISLNCGQSFRWKKRPSGEWAGVLAGYLWLMNQDEAGLNYRV
VTPVVQSEASPSESLPAKKAEMKECIDYEHMVKDYFQLDIDLESLYRQWSLADANFDKVA
KNFVGVRMLKQDPVENLFAFICSSNNNIQRITGMVEKLCETYGNHLLTYEDVAYYTFPSI
ESLAEEKVESKLRTLGFGYRAKFIQQSAAKIMKNGGRDWLLNLRTVSYLEAKSSLMTLPG
IGAKVADCICLMSLNHSVAIPVDTHVFQIAKANYVPHLSQTKSVTDKVYNEISAHFQSLF
GTYAGWAHSVLFSADLRHLRVPPPVAKKRNATDVTKEKPALGRAQRKKK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcgccaataatgaggataccatgtaaagtagcggaattgtctttggatatt
tcgctcaactgcggtcaaagtttcagatggaagaaacgacctagcggagagtgggctggt
gttttggcaggatatttgtggctaatgaatcaggatgaggctggcttgaattaccgtgtt
gtgactcctgtcgttcaatctgaagcgtcaccgtcagaatccttgccagccaaaaaggca
gaaatgaaggaatgtattgattatgagcacatggtgaaagattactttcagttggatatt
gatttagaaagtctctacaggcagtggtctctagcagatgctaattttgataaggtggcc
aagaatttcgtaggggtacgcatgctgaaacaagatccagtggaaaacttgtttgccttc
atttgctcatccaacaacaatattcaaaggataacgggaatggtagaaaagctgtgcgaa
acgtacggaaaccatctgctgacatacgaggatgtggcctattatacatttccatcaatt
gaatcgctagccgaagaaaaagtcgaatccaagttgcgaacacttggctttggttatcga
gccaagttcattcaacaatcggcagccaagataatgaaaaacggtgggcgtgattggcta
ttgaatttaagaacagtttcatatctggaagcgaaatcatccttgatgactctaccaggt
ataggtgccaaggtggcagattgcatctgcttaatgtcgctgaatcacagtgttgccata
ccggttgacacgcacgtctttcaaatagccaaggccaactacgtgccgcacctgagccaa
acgaaaagtgtgactgataaggtctacaatgagatcagcgctcactttcaatcccttttt
ggaacgtacgctggatgggcacattcggttcttttcagtgccgatttacgtcatctgaga
gtgccaccgcccgtcgccaagaaaagaaatgctaccgacgtgaccaaagagaagccggcc
cttggccgtgcgcaaagaaagaagaaatga
DBGET
integrated database retrieval system
