Daphnia magna (water flea): 116932353
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Entry
116932353 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116932353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116932353
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116932353
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
HECT type E3
116932353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
116932353
NCBI-ProteinID:
XP_032796030
UniProt:
A0A0P5FLT6
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Position
LG10:complement(2180844..2185685)
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AA seq
1052 aa
AA seq
DB search
MYCWGSMKHGELGLGGLEEEIITQPRISPFALADKIVQVGCGDNHTVLVMEDGKLYSFGS
NDFGQLGHGRSRTRAELVDGLEAHNITQVACGAQHTLAQNEWGEMFAWGSNSSGQLGLNV
EESIMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPELK
PCLVKFLHGIPISHIACGADFSFAVSPSGAVFGWGKNSFGQLGLGDSVDRPQPTQLKSLR
FQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQIA
CGRCHTLAFVPSKGRIYAFGLCGSGQLGTKSTANVNAPQLVLGQWETTVSVAGANNAGAL
ADESSSVNSEGNHLVVRNIFCGGDQSFALVSPYTENFESADYREHPAAMQILSIFPEEIK
KVRALLPDVAVDLDLLRYVETVFSHLACYNASFLRADGSHYGCSSKNHGLDLHLAAETFG
QISRIEHPTIYVLLRRCICNELFPSLNQSIPDIEILRVYLILPLYHEFQQPKYFEELHFP
FTSVLLNLKHDAAKVYDMWLASTNTDYFTRLINIFKQVVVHIVNLPSSFDPTETTRLGIR
LKTCLDMLKKLNNVNRQAVVKKVGHEQFYIPELTDKVDVKRDYFKWLVDAANKEFRLCNY
SFVFDAKAKTLLLEADQNIQMHSAMQEAATRGIFFGFPAVQQYLILEVRRDNLVNDTISE
LSKCASADLKKPLKVKFHGEEAEDAGGVRKEFFMLLLKEILDPKYGMFTHYQESRAIWFS
ELSLEEQGMYFLIGLLCGLAIYNFTIINLPFPLVLYKKLLAEPVHLDDIDGLCPTLMRSL
HSLLDYEGDDIDEVFCLSFVMSREVFGSVQTDELKPGGANIPVTQKNKQEYVDLYVDFIL
NKSIAKHFDAFNQGFHKVCGGRVLRLFQSHELMDLVVGNENYDWYALQENAEYKNGFSSD
HPTIRLFWEVFHELSLEQKKNFLLFLTGSDRIPILGMKALKVIIQRTAGGDSYLPVAHTC
FNLLDLPLYNTKEKLRYKLLQAIQQNQGFALA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttggggaagtatgaagcatggcgaactcgggttggggggtttggaagaagaa
ataataactcaaccaagaatttcaccttttgctctagctgataaaattgttcaagttggc
tgtggagataatcatacagtcttagttatggaagatggcaagctttattcatttgggtca
aatgattttggtcagttaggccacggaaggtccagaacacgagcagaacttgtggatggc
ctagaagctcataacatcacccaagttgcatgtggagcacaacatacacttgctcaaaat
gaatggggcgagatgtttgcttggggttccaattcaagtgggcagttggggttgaatgtt
gaggaatccataatgccaactcctaaaatggtaaaatctttggctaccaaacaagttgtt
caaatagcttgtggacgtagccattcaatggccttgacaaatgtgggtgaaatatactgc
tggggctccaacagccatgggcagctaggattaggatcttctggaacaccagagttgaaa
ccttgtttggttaagtttctgcacggaatccccatcagtcatatagcatgtggcgctgac
ttcagttttgcggtatctccttctggagctgtctttggttgggggaagaattcgtttggg
caattgggacttggtgattcagtcgatcggcctcagccgacccaattgaagagcttgcga
ttccaacgggtaacttacattagatgtgggatggatcacactgccgcgctaacccgcgac
ggaggggtattcactttcggagcggggatgtatggccaattgggccactgcacgtctgcc
aatgaaatgttgccaagaaaagtgttggaattaatgggtactaccgttactcaaatagct
tgcggaagatgtcatactctagcgtttgtcccttcaaaagggcggatatatgcctttgga
ttgtgtggatctggccagttggggacaaaatcaaccgccaacgtaaatgcaccacaactt
gtactcggacaatgggaaactactgtcagcgtggctggagcgaacaatgccggagcacta
gctgatgaatcatcatctgtaaattctgaaggcaaccacctggttgtacggaatattttt
tgtggcggagatcagagttttgctcttgttagcccctatacggaaaactttgaatcagct
gattatcgggaacatcctgctgccatgcaaattttaagtatttttccagaggaaataaaa
aaagtgcgagcacttcttccggacgttgctgtcgacttagaccttcttaggtatgtggaa
accgtcttctcacatcttgcctgttataatgcgtcatttttacgtgccgatggctcgcat
tatggttgcagttcaaaaaatcacggattggatcttcacttggctgcggaaacatttgga
cagattagccgaattgaacatccaacaatttacgttctgctacgacgatgtatctgtaac
gaactgttcccgagtcttaatcaatccatcccagatatagagattctacgtgtttacctc
attcttccgctgtaccatgagttccagcagcctaaatattttgaggagctacattttccc
tttacgtctgttctactgaatttaaaacatgatgcggcaaaggtttatgatatgtggttg
gcgtcgacaaacaccgactacttcactcggcttattaacattttcaagcaagttgtcgtt
cacatcgtaaacttgccatccagttttgatccaaccgagacgacaaggctgggcatcaga
ctcaagacgtgcctcgatatgttgaagaaattaaataacgtaaatcgtcaagcagtcgtg
aaaaaagtcgggcatgagcagttttacatcccggaactaacagacaaagtagacgtgaag
cgagattactttaaatggctagttgacgctgctaacaaggaattccggctgtgcaactac
tcgtttgtcttcgatgccaaagccaaaactctactattggaagccgaccagaacatacaa
atgcactcggcaatgcaagaagcggctacgagaggtattttctttggttttcctgcggtt
caacagtatctgatactcgaagtccggcgtgataatttggtcaatgataccattagtgaa
ctgtcaaaatgcgctagtgcagacctgaagaagccgttgaaggtaaagtttcacggcgag
gaagctgaagatgccggtggagtacggaaagaatttttcatgttgttgttgaaagagata
ctcgatcccaaatatggtatgtttactcactaccaagaaagcagggcaatatggttctca
gagttgtccctagaagagcagggcatgtattttttaattgggttgctgtgtggtttagcc
atctacaatttcaccatcatcaacttacccttccccctagtcctgtataagaagttgctg
gccgagcctgttcatttagacgacatagatgggttgtgtccaacattaatgcggagttta
cattctttgctggattacgagggagatgatatagatgaagttttttgccttagttttgtg
atgtcacgagaggtttttggttcggtccagaccgatgaattaaaacccggtggtgccaac
attcctgtgacgcaaaaaaacaagcaggaatatgtcgatttgtacgtggatttcatcttg
aacaaatcaattgccaagcatttcgacgcctttaatcagggctttcataaagtctgtggt
gggagagtccttcggttgttccagtcgcacgagctcatggatttagttgtcggcaatgaa
aattacgattggtatgcgctgcaagagaacgccgagtataaaaacggcttcagttccgac
cacccgactattcgtctattttgggaagtcttccacgagttgtctcttgaacagaaaaaa
aatttcctcctctttcttaccggttcagatcgtatacccatcttggggatgaaagctttg
aaagtaattatccaaaggacagcgggtggcgattcgtacttgcctgtcgctcatacgtgt
ttcaatctattggatcttccgttgtacaacacgaaggaaaagcttcgctacaagttgctt
caagccattcaacagaatcaaggttttgccctagcctaa
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