Daphnia magna (water flea): 116932388
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Entry
116932388 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: caprin homolog
KO
K18743
caprin-1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116932388
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116932388
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
116932388
NCBI-ProteinID:
XP_032796078
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All DBs
Position
LG1:complement(12977154..12980281)
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AA seq
617 aa
AA seq
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MPSIAANNTAVKTEKISVLDLPESFKSATVVIEKKCRNLEKRKIKLDGYREELARGKGLS
DEQQRAADRYEEVVANLELTKEFLTAFEKIGIETSKEEKKRKKKEIFEKQQHELARFKEL
FIIQEVFSCLCSPAAREDFLNGMHGSPQLTDSDLQKLDTFYSLVSIDRQNLPKTFNDAVL
SSAVHFQHLMEGRNKEVAGSTYREIKDLIFSIINNGYFDWKAPPEVEPEPLEPEVVEPII
ERTEAFQTTHMEPVYQNIPDETTYVEPGMEYIEPQVPLPIQPQIVPQAAAYFPVDIDTDF
NFIQESMIDAKPVLPTIPASVPMPLQTAPHVPVSLASMDSAVVMVHSQMPHSQMPHLAYP
HYAASMYAAHAAPLVPGPPSMQLPTSTQHQQQPPPQQIHQQPEQPSNDLPGEPVIHESPT
ALTTQVESQDNRATTSSTWAEEPQEEIPVFQQDQSRNESNTWTNSSYRSNDQDGRRGGYR
GRGNGGPRGGSRGGTSGYYNNSRGGYNDRQGNGERSYQNNDRHQGNGGDRNGMERGSYQG
GERSYQSNNGGGRYQGNNGERNYQGSYRSSGGDRGGNSYMPRGNSGGYRGGQPRGASRGS
SRGGGSYDGRNASFSKE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgatcgccgctaacaatacagccgtaaaaacggagaaaatttcggtcttagac
cttcctgaatcgttcaaatcagccactgttgttatcgagaagaaatgcagaaacttagaa
aaacgcaagattaagcttgatgggtatcgggaagagttggctagaggaaagggtttgtct
gacgaacaacagcgtgctgctgatcgctatgaggaagtggttgccaacctggaattgacc
aaggagttcctgacagctttcgagaaaataggaattgaaactagcaaagaagaaaagaaa
aggaagaagaaagaaatctttgaaaagcagcagcatgaattggcgcgctttaaagagctt
tttatcatccaagaagttttcagttgcttgtgttcacctgctgctcgtgaagattttttg
aatggaatgcatggttcacctcaactcactgattctgatctccaaaaactcgatactttc
tacagcctagtgtccattgaccgtcaaaatcttccaaagacattcaatgatgcagtcctt
agttcagctgttcattttcaacacctaatggagggtaggaacaaagaagtagcaggtagc
acctatcgtgagataaaggacctcatcttcagtattatcaacaatggctactttgattgg
aaggccccaccagaagttgagccagagcccctagaacctgaagtggtagaaccgattata
gaacgaacagaagcgttccaaaccacccacatggagccggtttaccagaacatccctgat
gagacaacctacgttgaacctggaatggagtatattgagccgcaagttccattgcccatt
cagccacagattgtcccacaagccgcggcgtatttccccgttgatatagatacggatttc
aatttcatccaagaatcaatgatcgacgctaaacctgttttaccgacaattcctgcgtct
gttcccatgcctctacaaaccgctccacatgttcctgtttcccttgcgtcaatggactcc
gcggtagtaatggtccactctcagatgccacattctcagatgccacatctggcgtatcct
cactatgctgcttcaatgtacgctgcccatgctgcacctcttgtgcctggtccaccgtct
atgcagctgccgacttccacgcagcaccaacaacaaccacctccccagcaaatccatcag
caaccggaacaaccttcgaatgatctccctggcgaacctgttatccatgaaagtccaact
gctcttaccactcaggttgaaagccaagacaatcgggcgacaacaagttcgacgtgggct
gaagagcctcaagaagaaatcccggttttccaacaagaccagagtcgtaacgaatccaat
acttggactaattccagttaccgttccaatgaccaagatggacgtcgcggaggctatcgt
ggacgtgggaacggtggaccaagagggggatcacgtggtggaacatccggctattacaac
aactccagaggtggatacaatgatcgccaaggaaatggcgagagaagctaccaaaacaat
gatcgtcatcagggtaatggtggtgatcgtaacggaatggaacgcggctcttatcagggc
ggtgaacgctcctaccaaagcaacaatggtgggggtcgctatcaaggcaacaatggcgag
cgtaactaccagggttcttaccgatcgtctggcggtgacagaggaggcaactcgtatatg
ccacgaggaaacagcggtggctaccgtggtggtcaaccccgaggtgcttcgagaggatcc
tctcgaggcggtggcagttacgacggcagaaacgcatctttttctaaagagtaa
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