Daphnia magna (water flea): 116932559
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Entry
116932559 CDS
T07514
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116932559
03036 Chromosome and associated proteins [BR:
dmk03036
]
116932559
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116932559
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116932559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
116932559
NCBI-ProteinID:
XP_032796215
LinkDB
All DBs
Position
LG10:complement(979806..987331)
Genome browser
AA seq
1778 aa
AA seq
DB search
MSKESRVDKDYTSEVDLFEDSSVRSSSADEVTERTLSGDKVSERDMSEDSSASKLFKEVK
DVGENPIPDSDKTVPNQYKSLVAKGIKKMTNEERSFFERYQQANQIHHCSLKCTTCLCQL
FLGNPENIQIHPVLGVLLCSACREFYDNSPFTKNVKGHDEYCRWCAEGCAVIRCDTCSNV
FCKTCLRRCLGRTSFAEITGSKCKWNCLVCNNLPLWTPRALGRMVMIAIKPCVGPIMAAV
DSNDPTVWLPNMIDDVEKLADHCKKLVTKIRSSWAKENVGSDRKSKNSDRLAKETDKVAV
VDCCRQLRKAVTTTNFSMKLLEKKMITKFKKKYGTTTDIDIDLSLEKSNSKGESARREGK
ANKLKIRNFTKRNSEQDHVGESVECSPSDAPHAFPSECFLDLATSHDTTLLRTKKSSDVN
DKSTKKEATPKLIRSNPSPMECTSDNILPENSKSKTATSSIRDLKCLGSVEPSALDPNQK
ARRDLLKDSTDSDLSNSLDSDISLAELKLSLHGKKKRRNSCLPVKDDPKLKCKCVVLLNR
IPNSNITFVQDDKRKVDRHDQEIDLPIKNPSNIERLVRIECEAETDSNSDSEKKEDQFTR
QSPTPEKQCAMKRRSRILEMGSSSSSDVEMETTAKEIAPPKFSTAPLIRDREEIARQALL
ASSDSDTDNLTCETENEDSHDKVVESTKQNSVEHDNVGIKNIEKVVKGVQVVDLTSDCEG
TTDISNIETDKLLRMSLNDPAAKTKRNPKDHETKNEAARRGKKKRRNQPSSDTEISESDI
EDRFKRIRLSPSAVERDSDNRNDDDSANEATVESASPVQTKKAVAGNTRNSSNSDDEDLN
TSQRSESGGSKGRKTIRKIMADTSLTDETKAAAREEENRKKRIAERQKFYNEAFVCGSAI
ADAQTNSLVLDFDPVTKKELVTVDKSLVTKLKLHQVQGVKFMWDACFESVERLKQHPGSG
CILAHCMGLGKTLQAVTLVHTVVTNKICQVDRVLVLCPVNTILNWVNEFKLWLGTTSGVD
VYEITTTSYSKNNNKEASRVQTLSKWFKGGGVLVIGYTMYLLLASENSKIDKTQEERDLC
ACSLVDPGPQLVVYDEGHVLKNEKTASYEALNKIATRRRIVLTGTPLQNNLEEYFCMVQF
VKPNLLGTITEFKNRFANPIKNGQAADSTDSDVRLMKRRAHVLHKMLEDSVQRFDYRVLT
PFLPPKHEYVISIKLSELQTKMYQYYLENHVKGGPKNSSRVKAAGLFADFQEFSRIWTHP
KALLLAEINRNKAKTKSNSDLKTTNMDATGDTTQKRYSHEDHGEPTVFEDGDELSCFDIG
SEKESGRASTSNSSVAHDARINQTATDDESGVTTSLPWWSQFCQVDMTKMELGGKLVLLM
DILRQCELIGDKVLVFSQSLVSLNLIEEFLAIENERKEKSQKSMASNEWTQDSVSRWRIN
HDYFRIDGQTSSEVRSNTCNIFNNPLNLRARLFLISTKAGGVGINLIAANRVIIFDASWN
PSHDVQSIFRVYRFGQQKPCYIYRFLAQGTMEEKIYDRQVTKLSLSCRVVDEQQIERHFN
SADLKYLYLFEPDSHLRRSTPILPKDRLLAELIIQRKEWIVTYHEHDSLLENKSEEELTE
AERKAAWDDFENEKRGVNMVRNESAVFMNMPGIADIFEALVGRTVAGVPLTSVASLIYNS
NPNITQEDFIARLRLTVDQMGSFTANQAITASVATAAGQRHGDLGRPLLIQRLLATDQNE
HLRSNSPQRTKSPDPSGIDVLVSLSPHNESASATTAPQ
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaatccagagtggacaaagactacaccagtgaagttgatctgtttgaagat
tcttcagttagaagttcttctgcagatgaagtcactgaacgaacattgtctggggataag
gtctcagagagagatatgtctgaagattcctcagcttcaaaattgttcaaggaagtcaag
gatgtgggagaaaatcctatcccagattcagataaaactgttccaaatcagtacaaatca
cttgttgccaagggaataaaaaaaatgacaaatgaggaacgcagcttttttgagagatac
caacaagctaaccaaatccatcattgctccctgaagtgtacaacatgtttatgtcagttg
tttcttggtaatccagaaaacattcaaattcatcctgttttgggtgtgttgttgtgcagt
gcctgcagagagttttacgataattctccctttacgaaaaatgtgaagggacacgatgaa
tattgccgctggtgtgccgaaggttgcgcggttatacgatgtgatacatgttcaaatgta
ttttgcaagacatgtctacggcgttgtctaggacgcacgtcttttgcagaaatcaccggc
agtaaatgcaaatggaattgcttggtttgcaacaatcttcctctttggacaccaagagct
ttaggtagaatggtgatgatcgcaattaagccttgcgttggaccaatcatggctgcagtt
gattccaatgatccgactgtttggttgccaaacatgatagatgacgtagaaaaattggct
gatcattgtaagaaactggtgacaaagattagaagcagttgggctaaagaaaatgtaggt
agtgacagaaaaagtaaaaatagcgacaggcttgccaaagaaactgacaaagtcgctgtc
gtcgattgctgccgtcagcttcgcaaagctgtgaccacaactaacttcagtatgaagtta
ttggaaaagaaaatgatcaccaagtttaagaagaaatatggcactactaccgacatcgac
attgacctatcacttgaaaaatccaactcgaagggggaatcagctcgtcgagaaggcaaa
gcaaataaattaaaaattcgcaattttacaaaaagaaatagtgagcaggatcacgttggc
gaatccgtggaatgttcaccttctgacgcgccacatgcatttccatcggagtgtttcctt
gatctcgctacttcacatgacacaactctgttacgaacaaaaaaatcgtcagacgtcaac
gacaaatcgactaaaaaagaagctacaccgaagctgattagatctaatcccagtccgatg
gagtgcaccagcgacaatattttgccggagaattcaaaatcgaagacggcgacgtcatcc
atccgggatttgaaatgtctcggttcggttgaaccatcagctcttgatccaaaccaaaag
gcaaggcgagacctattaaaagactccaccgattcggacctatcaaactctttggattca
gatatcagtcttgctgaattaaagctttccctgcatggaaaaaaaaagagaagaaatagt
tgtttaccagtgaaggacgatccgaagttaaaatgcaaatgtgtcgttcttcttaatcgc
atccccaattcgaacattacctttgttcaagatgacaaacgaaaagtagacagacacgat
caggagattgatcttccaattaaaaatccctcgaacattgagaggttagtgcggatcgaa
tgtgaagcagaaacagactcaaactcagactcagaaaaaaaagaagaccagtttacaaga
caaagtccaacgccagagaagcaatgtgctatgaaaaggcgttcccggatattagaaatg
gggtcgtcgtcatcgtcggatgttgagatggaaacgactgcgaaagagattgcccctccc
aagttttcaacagcgcctttgattcgtgatcgcgaagaaattgcacgccaggctttgctc
gcttctagcgactcggacacagataatttaacgtgtgaaaccgaaaatgaggattcacac
gataaggttgtggaatcgacgaaacaaaattctgttgaacacgacaacgtgggaataaaa
aatatagaaaaggtagtaaaaggagtccaggtcgtagatctaacgagtgactgtgaagga
actacggacatttctaatatcgaaacagacaaattactacgcatgtctcttaacgatcct
gcagccaaaacaaaaagaaaccctaaagaccacgaaactaaaaacgaagccgcgagaaga
ggaaagaagaaacgtaggaaccagccgagttcagataccgaaatatcagaatccgacata
gaagataggtttaaaagaatccgtttaagtccgtcggctgtcgaaagagattccgacaat
agaaatgatgatgactcagctaacgaggcaacagtagaatccgcatcacctgtgcaaaca
aaaaaagcggtcgcaggaaacacaaggaattccagcaattcagatgatgaagatttgaac
acatcccaacgttccgaaagcggtggttcaaaaggaagaaagaccataaggaagattatg
gctgatacaagtctaactgacgaaacgaaagcggctgcaagagaggaggagaacagaaag
aaacgcattgcagaacgtcagaaattctataacgaagcttttgtttgtggttctgccatc
gccgacgcccaaactaatagtttagttctggattttgatccagtaaccaagaaggaattg
gtcaccgtcgataaaagcctagtcacgaagctaaaactccatcaagttcaaggagtcaaa
ttcatgtgggatgcctgttttgagtccgtggagagactcaaacaacatcctggttctgga
tgcattctggcacattgtatgggtctgggcaaaactctacaggctgttaccttggtacat
acagtagtaacaaacaaaatttgtcaggtggatcgtgtcctcgtattgtgtcccgtaaac
acaatcctcaactgggtaaacgagtttaaactatggcttgggacaacatcaggcgttgat
gtgtatgaaattactacaactagttactccaagaacaacaacaaagaagcgagccgcgtg
caaacgttaagcaagtggttcaaaggcggaggagttctggtcatagggtacaccatgtat
ctgcttctagctagcgaaaatagcaaaatagataagacccaggaagaacgggacctgtgt
gcgtgttcgttggtggatcctgggccacaattggttgtttatgatgaaggtcacgtttta
aaaaacgaaaaaaccgcttcctatgaagcgctaaataaaatagccacccgtcgccgcatc
gtcttaacaggcacacctcttcagaataacctcgaggaatatttctgcatggttcagttc
gtcaaacccaatctcctgggaacaattacagagttcaagaatcgctttgcaaatcccatc
aagaacgggcaggcggccgattccaccgacagtgacgtaaggctgatgaaacgaagggca
catgtgttacacaagatgctcgaagattccgttcagcgatttgattacagagttttaacc
ccgtttctacccccaaagcatgaatatgtgatatcaatcaaattgtcggagctgcaaacc
aaaatgtaccagtactatctcgagaatcacgtcaaaggtggtccgaaaaattccagccgt
gtaaaagcagccggactctttgccgatttccaagaattctcacgcatttggactcacccg
aaagcgttgcttttggctgaaattaatcgcaacaaagccaagacaaaaagcaatagtgat
ttgaagactactaacatggatgcaactggggataccacacagaagaggtactcccatgag
gatcatggagaacctactgttttcgaagacggtgatgaactttcatgtttcgatatcggc
agtgaaaaggaatcggggagagcaagtacgtctaacagctcagtagcgcatgacgcccgt
ataaaccaaacggcaacagacgatgaatcaggtgtgacgacttcgttgccttggtggtcg
cagttttgccaagtggacatgactaaaatggaacttggtggcaaactggttcttctcatg
gacattcttcgtcaatgtgagctcattggtgacaaagttctcgttttcagtcagtccctc
gtatcgcttaatctgattgaagaatttctcgccattgaaaacgaacggaaagagaaaagt
caaaagagtatggctagtaacgagtggacgcaggattccgttagcaggtggcgaatcaat
cacgattattttaggatagacggacagacttcatctgaagtgcgttccaacacgtgcaat
attttcaataatccattgaatcttcgagctcgtctcttcctaatctccaccaaagccggt
ggggttgggatcaatttgattgcagcgaatcgtgttatcatatttgatgcctcatggaat
ccttcacacgatgtccagagtattttccgagtttatcgttttggtcagcaaaagccatgc
tatatctatcggttcttagctcaaggtacaatggaagaaaagatctatgatcgtcaagtc
acgaaactgtcgttgtcttgccgcgtggtcgacgagcagcagattgaacggcatttcaac
tcggctgatttaaagtacttgtatctatttgagcctgacagccatctacgccgatctaca
cctattttgcccaaagatcgtcttttggccgagttgatcattcagagaaaggaatggata
gtaacgtaccacgagcatgattctttgctagaaaataagtcggaagaagaactcacggag
gccgaaagaaaggccgcatgggatgacttcgaaaatgagaaacgtggcgtaaatatggtg
aggaacgaatccgctgtgtttatgaacatgcctggaatagcggatatttttgaagcactg
gttgggcgaacggttgctggtgttccattaactagtgtagcgtctttgatctacaattca
aatccaaacatcactcaagaggattttattgcaagacttcgactgactgtggatcagatg
ggaagttttacggcgaatcaagcgataacagcttcagtcgctaccgctgctggccaacgg
catggggatttgggaagaccattacttatccagcgactgttagctaccgatcaaaacgag
catcttcgtagtaattcgccacaacgaacaaaatcgccagaccccagcggtatagatgtg
ttagtttctcttagtccgcataatgaatctgcaagtgcaacaactgcacctcaataa
DBGET
integrated database retrieval system
