Daphnia magna (water flea): 116932564
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Entry
116932564 CDS
T07514
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116932564
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116932564
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
WDR55
NBCH_WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
116932564
NCBI-ProteinID:
XP_032796225
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Position
LG10:708449..711616
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AA seq
811 aa
AA seq
DB search
MAATVNNVAVGTAYTSVGCNRTPHALDWGNNNLVCFAASRAVAVYDPKFAGNHGKILHTL
YEHQDRVNCVRWIQDGEFSPEMEILSGSADRTVIVWAYGGTSGGVGCQRVSKLIGLDASI
NSVDGFYWKYNQNIATVVVAVGGDQICVWLRDGQDDEWRILQKFITKPVLMFDCVVNLLL
DYKIPLIACAGDDGSVQLLNFQMLDGELSCVRTMKIPGHEDWVRALAFTVEDSGDLLLAS
AAQDTLIRVWRISPESSKDKSDGDKLALQSNQGQFSIIYENELKFRCQLETVLQGHENWV
YGLHWQPSELKDGCRKNPLRLLSCSMDKTMTIWGADPSSGIWFDQVRVGEIGGNTLGLYG
CRFGNQGTSILAHGYQGALHLWHDVEGQWKPGVVCSGHFDSVEDFIWDPSGDFAITVSVD
QTSRLHAPWIQESNEEITWHELSRPQIHGYDLSCITSLGRFRFASGAEEKVIRVFEAPHN
FLENFARICHIDVPLPELQNAPQGAAVPALGLSNKPIYQTDGPTVPKNAHSKSDLYAENH
FTPTLLMAPPTEETLLQNTLWPEVQKLYGHGYELFSLAADPQCKLLVSASKAQKAEHASI
IVWDIADWSLIGKLEAHALTVSQMAFSPDGQKLVSVSRDRNWVVHEKVQTDDGKFTLKTV
AKGSGGSRILWSCHWSPDSRYFMTGSRDKRVIVWEPVAGDTLSYRISGKPLECADSVTAV
ACGPNVLPTGCYLVAIGLDNGQIQLYNWIPAPSDSIPQWELLANLNQSQAHHMTVKRLRF
RPVNGNDSGKETLQLASCGADNTFKIFNLEF
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccgtgaacaacgtggctgtcggaactgcctacacaagtgtaggctgtaat
cgcactcctcacgctcttgattggggaaataacaatttggtttgttttgctgcttcgcgt
gctgtagcggtttatgatccaaagttcgccggcaatcacgggaagattttgcatacgctg
tatgaacatcaagaccgcgtcaactgcgtcaggtggattcaagatggagagttttcacca
gaaatggaaattcttagtggatctgcagacagaacagttattgtttgggcttacggtgga
acatcaggtggtgttggttgccaaagagtttccaagttaataggtctcgatgcaagtatt
aattctgtcgatggcttctactggaaatacaaccaaaatattgccacagttgttgttgca
gttggaggtgaccaaatttgtgtttggcttcgagatggtcaagatgatgaatggagaatt
ctgcaaaagtttataacaaagcctgttttgatgtttgactgtgtagttaatttattgctg
gattataaaatccctctcatagcatgtgctggagatgatggatctgttcagcttctcaat
tttcagatgttagatggagaactttcttgtgtcaggacaatgaagattcctggtcatgaa
gattgggttcgcgctttggcttttactgttgaagatagtggtgatttgctgcttgcttct
gcagcccaagacacactcattcgcgtttggaggatttcacctgaaagcagcaaggataaa
tctgatggtgacaaattagccctccaatccaatcaaggacagttcagcatcatttacgaa
aacgaactgaaattcagatgccaacttgaaactgttttacaaggtcatgaaaattgggtg
tatggccttcattggcaaccgtctgagttgaaggatgggtgtcgtaaaaatcctttgaga
ttattatcctgttctatggacaaaaccatgacgatctggggtgcggatccatctagtggc
atttggtttgaccaagtacgtgttggcgaaatcggtgggaacactttgggactttacggg
tgccgctttggcaatcaaggcacctcaatcttggcgcatggctatcagggagcccttcat
ctatggcacgacgttgagggccaatggaaaccaggcgtcgtgtgtagtggtcattttgat
tcagtagaagatttcatatgggaccccagtggtgattttgctattactgtcagcgtcgat
cagacctctagactgcacgcgccatggattcaggagtccaacgaagagatcacgtggcac
gaattaagtcgaccacaaattcacggctatgatttatcttgcatcacttctctgggacgc
ttccggttcgcttcaggagcagaagaaaaagtcatcagagtttttgaagcgccccataat
ttcctggaaaattttgctcgtatctgtcatattgacgttccccttccagaactacagaac
gctcctcaaggggctgcagttccagcattgggcctttccaataagcccatctaccaaacg
gatggccccacggtcccgaaaaatgcccattcaaaatcagatttatacgctgaaaatcac
tttactccaacgcttctcatggctccgccaacggaagaaaccctccttcaaaacacgctg
tggcctgaggttcagaaattgtacggtcacggttacgagcttttcagcctggcggctgat
cctcagtgcaaactcttggtgtcggcctcgaaggcccaaaaagcggaacatgcatccatc
atcgtttgggatattgccgattggagtctgattggaaaactggaagctcatgccttaact
gtatcgcaaatggcattttcacctgacggccaaaagctagtgtccgtgtcccgtgacaga
aattgggtcgtccatgaaaaagtccagacggatgatggcaaattcactttaaagacggtg
gcaaaaggtagcggtggaagtcggatcttgtggtcatgccattggtctcctgattcacgc
tatttcatgactggatcacgtgacaagcgtgtcatcgtttgggaaccggttgcaggggat
actttgtcgtaccgaataagtggcaagccactggaatgcgccgattctgtcacagctgtg
gcttgcggtcccaatgttctcccgactgggtgttatctggttgccatcggtttggacaac
ggccaaatacagctttacaattggattccagcaccatcagattccattccacagtgggaa
ctcctggccaacctgaatcaaagtcaagctcatcacatgactgtcaaacggttgcgattc
cgtccagttaatggaaacgacagtggcaaggagactctccagctggcctcgtgtggggct
gacaacaccttcaaaatcttcaatcttgaattttaa
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