Daphnia magna (water flea): 116932573
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Entry
116932573 CDS
T07514
Name
(RefSeq) high-affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116932573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116932573
Transporters [BR:
dmk02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
116932573
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
116932573
NCBI-ProteinID:
XP_032796233
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Position
LG10:complement(891721..897105)
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AA seq
630 aa
AA seq
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MINIGGIVAIVVFYLLILFVGIWAAKKKGNGGESEEEVMLAGRNIGLFVGIFTMTATWVG
GGYISGTAEEIFGKGLIWCQAPFGYALSLVFGGLLFANKMREQGYVTMLDPFQDAFGERM
GGMLFIPALCGEVFWSAATLAALGATISVIVDIDVNISVVLSACIAIFYTLFGGLYSVAY
TDVIQLFFIFFGLWVSIPFALTNPAVSSISPSQVDWVGTLEPKYYGQYFDYGMLLIFGGI
PWQAYFQRVLSSKSASRAQILSYVAAIGCVVMALPSVLIGAVAKATDWNQTDFRGKGNIP
LDEEQARMVLPMVLQYLTPAYVSFCGLGAVSAATMSSADSSVLGASSMFARNVYRLIFRP
RASEHEIMWVMRISIFVTGAMATTMALTVHTIYGLWYLCSDLVYVILFPQLLMVVHFKPY
CNTYGSVASYIIGFLARISGGEPLMNLKPFIYYPGWNGTEQLFPFRTLAMLLSLISVIAF
SMLTRYLFESGKLPPSWDFLRCVVNIPEDVVRVSGSGDELEPHDAMGEMAVMTGLADVRK
YSATDEMNGRVNPALNLGSDSDEEASQQLASSVAQRAKLQQQLSIGANSIDSPSHRPMIN
RKANMSSAIGSGSAAAAVVANNTGDKQTTL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacattggaggaatcgtggccattgtggtcttctacctgctcatcttgttcgtc
ggcatttgggcagccaagaaaaagggaaatggaggcgaatcggaggaggaggtcatgttg
gccggacgtaacattggccttttcgttggcatttttacaatgaccgcgacatgggtgggc
ggtggttacatttctggaacggccgaggagatattcggcaaaggattgatctggtgccag
gctccgttcggttacgcccttagcctcgtcttcggcggattgctcttcgccaataaaatg
agagagcaaggttacgtcacgatgctcgatccattccaggacgcgttcggcgaacgcatg
ggcggaatgctcttcatcccggccctgtgcggagaggtgttctggtcagctgctacatta
gccgctttaggggcgaccatcagcgtcatcgtcgacattgacgtcaacatcagcgtcgtc
ctatcggcgtgcatcgccattttctacacgctcttcggcggtctgtattcggtggcctac
accgacgtcatccaactgtttttcatcttcttcggattgtgggtcagcattccattcgct
ctgaccaatccggccgtcagttccatttcaccgtcgcaggtcgattgggtcggtacgctg
gaaccgaaatattacggccagtatttcgattacggtatgctgctcattttcggcggcatt
ccgtggcaggcttattttcaacgtgttttgtcgagcaaatcggccagccgggcgcagatc
ctgtcctacgtggccgccattggttgcgtcgtaatggccctgccgtccgtcctaatcggc
gctgtggctaaagccactgactggaatcaaacggatttccgcggtaagggcaacattccg
ctggatgaagaacaggctcgtatggtcctgcctatggtcctccagtatctaacaccggcc
tacgtttctttctgcggattgggagccgtttcggctgctaccatgtcatcggccgactcg
tccgttctcggagcgtcgtccatgttcgcccgcaacgtttaccggctcatctttcggccg
cgggcatccgaacacgagatcatgtgggtcatgagaatctccattttcgtgacgggtgcc
atggcaaccacaatggctctgactgtccacaccatctacggcctttggtatctctgctcc
gatttggtgtacgtcatcctcttcccgcagctgctgatggtcgtccatttcaaaccgtat
tgcaacacgtacggtagcgtagcgtcttacatcatcggtttcctggctcgcatctccggc
ggtgaaccgctgatgaacctcaagccgttcatctactacccaggatggaacggaacggaa
caattgtttccattccgcacgttggccatgttgttgtcgctcatttcggtgattgcgttc
tccatgctgacgcgctatttgttcgaatcgggcaaactgccgcccagttgggacttcctg
cgttgcgtcgtcaacattccggaagacgtggtgcgagtgtcgggctctggcgacgaatta
gagccgcacgacgccatgggtgaaatggccgtcatgacgggtttggccgacgtgcgcaaa
tattcggccaccgacgagatgaacggccgagttaatccggccctcaacctgggcagcgat
tcggacgaagaggccagccagcaattggcttcgtccgtcgcccagcgagctaaattacaa
cagcaattgtccatcggtgctaacagcatcgattcgccttcgcaccggccgatgatcaac
cgcaaggcaaacatgagctcggcaataggatccggttcggcggccgcggcggtagtggct
aataacacgggagataagcaaaccactctttga
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