Daphnia magna (water flea): 116932680
Help
Entry
116932680 CDS
T07514
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116932680
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116932680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
Myb_DNA-bind_7
DUF7573
Motif
Other DBs
NCBI-GeneID:
116932680
NCBI-ProteinID:
XP_045035929
LinkDB
All DBs
Position
LG1:complement(6825540..6858679)
Genome browser
AA seq
2148 aa
AA seq
DB search
MSSNGTAEMVCSKPSRVAGKSGLERSATGSGLSAGRAVQPSNSDIIISNANKNTPEKRSS
PACSESPRKTLRRRGVKTEDDDDEDADMAATTTTTTTPADETNDYYPVAEDNVAATAVVD
TVCEDVSVAVTGKKNIRGKVWRARNGDYVRYLCVDDGADYRPGDAAYIESQSADQPFFIC
TIQEFRRSKRDTLMVNIKWYYRPCEVPETVYQLLVQDRNTEQGNKISFLHDPVIKGRELF
ISDATDTYPVSLLRGVCRVQHFTDIQGAEKFSPFKDSFFYILGYNPETRRLASTQGEIRV
GPSHQARLPELRAQLGLDKRPERCEDWEEPRWVPPPNAPGVRDGDLIVYIQAARSVAAFV
GMCDGGSPDDGCLAASRDDTTINAMDVLHNSSYDLGKALQTLAKCPVPKGIDKKWSEDET
KRFVKGLRQYGKNFFRIRKDLLPHKDTSDLVEFYYLWKKTPAAANQRPHRRRHRQSVLRR
IRTTRNTRAAKEEPGDLSSASEDDNSDEDSDSRDLAAYHCRHCFSTSSKDWHHAGKDKAL
LCTDCRVHFKKYGELPLLKTTQQAQASESEARSEPPYMFRPVQNPDDEEVEGRVRTRTRT
KELNARNRPKQDSGNNSPEPEGNERRSHRKSPSSASNCSSSSSSVVHEKDKGNNGNKAKS
MVESPSKGHKRRHGGGGAGSTGGSGGTGGEVPGPDREQAGNGNEDERGQPRQKKKKNDAN
SESPSESVSSESSSLEDNGMDGLDGEVDQDLEPSEARSAGSGSAAGGSRTSSPEMPAGKS
SDANPSAVAEQSTGPNEPSAVQISSVNNASCPTSGPTSTAVLANGVGSNDGMPDEKKRSD
SPSPPLTLTGPPPRPGSFEPVKSNQSDDLPPMVKLEPDYNPAANNSATNEDVKSRPAALL
SPSSQDKMASLGGMDGKMPPAPWLGKEEMSLSNFGAGGGGGGPTSPKLQSPTTSSCPPPL
DMSIAAADVASGALRNASSGGASSGSGLHPSPFMVPPAHSGFIRPYAPLESAAAVADAVA
YSMASPAPTTLATSISTGGPLGLGPLPMQGTRDLPEQSEPHNLKIKQEMVDPAAVAAAAA
AAASSAVNSASLRDMSSIPRDGSMPPLGGGFVSYPPTVPMASLMEPKREPGLAHPHPTAS
PRLDKSVGGMGLGGSSSSNSSKSSPAIKKASTPTPQQHHQQQQQQQQQQQQGLTQSQQSQ
PPAPPPPAHSLPYPPHFLPHGLGLGPPQGLPLSPYHQPGAHAYSPYYPYPFAYHYPPMRM
HAPPPPASSGPRPQSPTSFAVVSSGSGNFPPSSVANYHQSSLNLGNFHASPSGVVNPFAP
GGPAAGNNGNGNNGSMSASMHPSPPVTSTSSSSSSSSSSSGHGNVSGRPYSNKGPSDPSQ
MAPTQPSRSRSPPLSSSSSSSAGPNVGQGPLKRGPSPPPKRPHHPSSVAMPAMSHSMSSS
SPYLPIFSSPASSSGGLGSGGYPPTSGSMPTYSGVGPSSFSFGAPSLADLQAKSESPWNH
HPHHPHSLPLPLSHPHHHLQPRSSTPIQPVASTSTLSHPAAGLTLAPVSPTVGNHLMAGL
VPQSSASSSSAAAAAAAAAAAAAAALGASHDEANNTMHEDMDDDAPSPVTNTIPRGPSPE
PRIEDSECHRSQSAIFLRHWNRGEGSSCARTDLTFKPVPDSKLARRREERLRRQAERDRD
EREKEKERERAAAHARKAATPDKRETPKPSTSGAGPIETITSPGFDRFGPRPYPDTPALR
QLSEYARPHTGFSPGGMQRNVQGGLGLGPPAMDPMLHYQLASMYGAGARERLELELEREK
RERELRELREREISDRFKEEMLKNGAGMPPGMGMPGGPGGLGPRLSGPLDPHWLELHRRY
AGIPGGPPPGAGLGPPPGFGLYQLGGNPAGGGGLNPMERERLERLGLQLPSGMGGSMGGP
QGPGSGGGGGGGGGGPGDPRSEAQARDHQAAVDRLQAERIHAAMADQLRLQMAGLNPELH
THAHAHTHNHLHLHPSGQDMPPPPGFPLNAGYPRPPPGMLHQDSALGLHPAAAAAMLGRP
YDEQFARQFAAEQQLQRQMMEQRFPHPGAPPSGAPSGPSLHPHAHPNIVAQHEEYIRYNN
TVRTSDDGFFWFGQFLNEISLSHSRQQQQREREMKVRAIEEAARGGRP
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaatggaactgcagaaatggtgtgttcgaaaccttcgcgtgtggccggcaaa
agcggtttagaacgatcggctaccggaagcgggttatcagctggtcgtgccgtccagcca
tcaaacagtgacataattatcagcaacgccaataaaaacactccggagaagaggagctct
cccgcgtgcagcgaatcgccgcgcaaaacgttgcgacgccgcggcgtcaaaacggaagac
gacgacgacgaagacgctgacatggcggcgacgacaacgacgacgacgactcctgcggac
gaaacgaatgactactaccccgtggcggaagacaatgtggccgccactgcagtggtggac
actgtctgcgaggacgtgtccgtcgccgtgacgggcaaaaaaaatattcgcggcaaagtt
tggcgagctcgcaacggcgattacgtcagatacttgtgcgttgacgacggagcagattat
cgtccaggagatgccgcttacattgaaagccaatcagctgaccaacccttctttatctgc
accatccaagaattccggcggagcaagcgcgacacattgatggtcaacattaaatggtac
tatcgaccctgtgaagttcccgaaacggtgtatcagctgttggtgcaagaccgcaacaca
gaacaaggcaacaagatctcgtttcttcatgatcccgtgattaaaggccgcgagctgttt
atatccgacgccaccgacacctatcccgtatccttgctcaggggcgtgtgccgcgtccag
catttcactgacatccaaggcgctgagaagttttccccattcaaggattcgtttttctac
attttaggctacaatccagaaacacgcagactggcgtccacccagggtgaaattcgggtc
gggccgtcccaccaggcccggctaccggaattgcgtgctcagttggggctggacaaacgt
ccagagagatgcgaggactgggaggagccgcgctgggtgccaccgcctaacgctccgggt
gtgcgcgatggcgatctgatcgtctacattcaagctgcccgttcggtggccgcttttgtc
gggatgtgcgatggcggatcacccgacgacggatgcctggctgcatcccgtgacgacacc
accatcaacgccatggacgtgctgcacaattcgagctacgatttggggaaagcgctgcag
acgctggccaaatgccccgtacctaaaggcatcgacaagaaatggtccgaggacgaaacg
aaacgtttcgtcaaaggactacgacagtacggcaagaactttttccgcatccgtaaggac
cttttgccccacaaggatacgtcggacttggtggaattttactacttgtggaagaagaca
ccggccgcagccaatcaacgacctcatcgtcgacgtcatcgacagagtgtcctccgccgg
atacgcacgacccgcaacactcgcgccgccaaggaagaacccggagacttgagctcggcc
agcgaggatgataattctgatgaagattcagattcgagagatttagctgcttatcactgt
cgccactgtttctctacatcctcgaaagattggcatcatgcgggcaaggacaaggccctc
ttatgtacggattgtcgagtgcactttaaaaaatacggcgagttgcccctgttaaaaact
actcagcaagcccaggccagcgagagtgaggctcgctcagagccgccgtacatgtttcgt
cccgtccaaaatcctgacgatgaagaagtggagggccgtgttcgcactagaacacgcaca
aaagaactgaacgcgaggaatcgacccaagcaagacagcggcaacaacagtccggaaccg
gaaggcaacgagcggcgaagtcaccggaaatcgcccagctcggccagcaactgttcgtcg
tcgtcgtcttcggtcgtgcatgagaaagataaaggcaataacgggaacaaagccaagtcg
atggtggagagtccgagtaaagggcacaagagacgccacggaggcggaggagctggaagc
actggcggcagtggcggcaccggtggcgaagtgcctggtccagatcgcgagcaggccggc
aacggcaacgaagatgagcgtggtcagcctcgtcaaaagaaaaagaaaaacgacgccaat
tctgaaagcccatcggaaagtgtgtcgagcgaaagcagctcactggaagataatggtatg
gatggattggacggcgaagttgaccaagatctggagccaagcgaagcccgtagcgccggt
tccgggtctgccgctggcggttcgcgaacctcgtccccggaaatgccggccggcaagagc
tccgacgccaatccgtctgccgttgccgagcaatcgactgggccgaacgagccctccgcc
gttcaaatctcgagcgtcaacaatgcctcttgcccgacgtccggcccgacgtccaccgcc
gtcctggccaatggagtgggctccaacgatggaatgccggacgagaagaagagaagcgat
tcccccagtccgccgctgacgttgaccggccctcccccacgtccgggcagtttcgaaccg
gtgaagtcgaaccagtccgacgatttgcctcccatggtgaaactggaacctgactacaat
ccggccgccaataattctgcgacaaacgaggacgtcaaaagccgtccggcagcgcttttg
tcgcccagctctcaagacaaaatggcgtctttagggggcatggatggcaagatgccgccc
gccccgtggctgggcaaagaggagatgtcactctctaatttcggcgccggtggcggtggc
ggcggcccaacgtcgcctaaactgcagtcgcccaccacgtcgtcgtgtccgcctccgctg
gacatgtcgatcgccgcggccgacgttgccagtggtgccctcaggaatgccagcagcggt
ggtgcctcatcggggtctggcctgcacccgtcgcctttcatggtgccgccggcccattcc
ggcttcattcgaccctatgcgccgctggaatcggccgccgccgtggccgatgcggtcgct
tactctatggcgtctcctgccccgacgacgcttgccacttcgatttcgactggcggcccg
ttgggtcttggaccgttgccgatgcagggcacgcgcgacctgcccgaacagagcgaaccg
cacaacttgaaaatcaaacaggaaatggtggatccggcggccgtggcggcagcggcggcg
gcggcggcctcgtcggctgtcaactcggcctccttacgggacatgtcttccatcccgcga
gatggatcgatgccgcctttaggcggtggcttcgtgtcctatccccccactgtccctatg
gcctctctgatggaacccaagcgcgaacctggactggcacatccccacccgacggcctct
cctcggctggacaagtcggtcggtggaatgggtctcggtggcagttcatcgtcaaacagt
tccaaatcgagcccggccattaagaaagcatctacgcctactccgcagcagcaccaccaa
caacagcagcagcagcagcagcaacagcagcaaggtctcacgcaatcgcaacaatctcag
ccgccagcacctcctccgccggcccattctctgccttatccgcctcatttcctgcctcac
ggtctgggattgggaccgcctcaagggttgcctctgtcgccgtatcatcagccgggagcg
cacgcttattctccctactacccgtacccgtttgcgtatcactacccgcccatgcggatg
cacgcccctccgccgccggcgtcgtctggaccgcggcctcagtcgccgacgtcgttcgcc
gtcgtctcgtccggatcgggtaatttccctccgtcctctgtcgccaattaccaccagagt
tctctcaacctgggcaacttccacgcgtcaccttcgggcgttgtcaacccgttcgcgccc
ggcggtccggcagccggcaacaatggaaacggaaataatggatcaatgtcggcgtcgatg
catccttcgccgcccgtcacttcgacgtcgtcttcgtcgtcgtcgtcctcttcctcttcc
ggccacggcaacgtcagcggacggccctacagcaacaagggaccgtcggatccgtctcaa
atggcaccgacgcagccttcgcgatcacgatcgcctccgctctcctcttcctcctcctcg
tctgctgggcccaatgttgggcaggggcctcttaagcgagggcccagcccgccacccaaa
cggccgcaccatccgtcttcggtagccatgccggccatgtcgcactcgatgtcttcgtcc
tcgccgtacttgcccatcttctcgtcgccggcctcgtcgagtggcggtctcggcagcggc
ggctatccgcccacttcgggctcgatgccgacgtattccggcgtggggccgagctcgttt
agtttcggtgctccgtcgcttgctgatttgcaagccaaatcggagtcgccctggaatcac
cacccgcatcatcctcactcactgcctctacctttgtctcatccgcatcatcacctgcag
cctcgttcgtccacgcccatccagccggtggcctcgacctcaacattgtcccatccggct
gccgggctgacgttggcgcccgtttcgccgacggtcggcaaccatttgatggccggactt
gttcctcaatcatccgcctcctcttcgtcggcggctgctgctgctgctgcggcggcggca
gcggcggcggcggccctcggggcctctcacgatgaagccaacaacacgatgcacgaggac
atggatgacgatgcgcccagtccggtgaccaacaccattccccgcggaccgagtcccgaa
ccaagaattgaagattccgagtgccatcgcagccaaagtgccattttcttgcgtcactgg
aatcgcggcgaaggaagctcctgtgctcgaaccgatctcacttttaagccggtgcctgat
tccaagttggcgcgccgacgggaagagcgactacggcggcaagctgaacgcgatcgggat
gaacgagaaaaagaaaaagagagggaaagagctgctgctcatgcgcgaaaagcggcaacg
cctgacaagcgcgaaacgcctaagccttcaacgtctggagccggaccaatcgaaaccatc
acttctcctggattcgatcgattcggcccacgtccgtaccccgataccccggccttgcgt
caattgagtgaatatgctcgtccccatacgggtttctctcctggtggtatgcaacgaaac
gtccaaggcggacttggactcggcccgccggccatggatcctatgctgcactatcagctt
gccagcatgtatggcgccggagcacgggagcgtctcgaactggagttggaacgtgagaag
cgagagcgagagcttcgagagctgcgagagagagaaatatctgatcgattcaaggaagag
atgttgaaaaatggagccggcatgccaccgggcatgggaatgccgggtggtcctggaggt
cttggaccgagactttccggcccccttgatccccattggcttgaacttcatcgcaggtat
gctggaatacctggcggcccacctcctggtgcaggattaggtcctcctcccggtttcggt
ttgtaccaattgggaggtaatccagctggaggtggcggactgaacccgatggaacgcgaa
cgactcgagcggctcggcctgcagctgcccagcggtatgggaggctcgatgggcggacct
caaggacctggcagtggaggtggcggcggcggcggtggtggtggaccaggcgacccgcgt
tccgaggctcaagcgcgagaccatcaggcagccgtcgatcggttgcaggcggagcgcatc
catgcagccatggcggaccaacttcgtctacaaatggctggtcttaaccccgaactccac
actcacgctcacgcccacactcacaatcacctccatctccatccctcaggtcaagatatg
ccaccgccgccgggattcccgctcaacgccggatatcccagacctccgccgggcatgctt
caccaagacagcgcgctgggactgcatccggccgctgccgccgccatgctgggtcgtccc
tacgacgaacagtttgcccggcaatttgcagctgaacagcagctccagcggcagatgatg
gagcagcgattccctcatcccggtgctccaccctctggcgcaccttcaggtccttcccta
catccccatgctcatcccaatattgttgctcaacacgaagagtacattaggtataataac
actgttagaactagtgacgacggcttcttctggttcggccagtttcttaatgaaatttcg
ttatctcactccaggcaacagcaacagcgtgaaagagagatgaaggtacgagccatcgag
gaagctgctcgcgggggtcgaccttag
DBGET
integrated database retrieval system
