Daphnia magna (water flea): 116932968
Help
Entry
116932968 CDS
T07514
Name
(RefSeq) ribonuclease Z, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116932968
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116932968
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116932968
Prokaryotic type
116932968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
116932968
NCBI-ProteinID:
XP_032796757
LinkDB
All DBs
Position
LG10:complement(9215790..9218870)
Genome browser
AA seq
820 aa
AA seq
DB search
MNFRFPFLNVVVFTARSFHSTQRLSGKKRNEHLLNLLTTMPLEKSHVARLQSERQAKKVT
KVKYPPGTVTLQVLGSGVRGAPKSLYMFTDQSCYLFNCGEGSQRLAHEHRFKLSKVEQIF
FTHTSWGNVGGLPGISLTIQDVGVPNITLHGAPGLGDLFVAASRFIILKDLQVNHIDATN
PESTFEDAVMKMNYIPIMPDETGKLPRSATNSPIEEEDVTNYYSREKGNPEDVPAAKRTR
VEKNGDMNPSSKAALAYICRLHPKQGMLMAEKCVEFGVPPGPLYGQLKAGQDITLPNGKT
VLASDVRSPDDPGPVFVVVECPDESYLDNFVSEPQLRKLQRRNGATELDCPKVVVHFTPI
ELTRHPKYQEWMGGFDADACHMMLGFTKDGEERRGFGSLAVHRIQHQLHLLDSEIFPHLP
FDLRVDGEPEHSEASELDCQTLTTYYLRPLKKLDLSLVPILKPQEYVDESLSQEGFKLSL
DALKLTLADAVPISNKTYPKLVFLGTGSCIPNKTRNTSAILVELEKDRFILMDCGEGTYG
QIVRFFGHERAAQVLSNLVGVYISHLHADHHIGLIGLLQGRQHSIERTKSDAGPLMLIAP
HQINFWLKTYHYSFERIRQYYTLVACANLFEGKTPDPALITGLNLKSIVTTHVRHCPNAF
GVSLTTADGFKLTYSGDTMPCLSLIDIGRDSDLLIHESTMEDGMEVEAQKKTHCTTSQAI
EVGRSMGAKFTLLTHFSQRYSKIPIFNEKSFASNTIGVAFDNMQISPDRLHHLPYFIPSL
KLMFADHCEEMDNKTNKRKLRQEREEKHKQLQRSAQHLGN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcgtttcccttttttaaatgtggtagtcttcacagcacgtagttttcattcc
acccaaaggttatccgggaaaaagagaaacgagcatctattaaatttgctcaccaccatg
ccgttagagaagagtcatgttgcccgacttcaatcagaaagacaagcaaagaaagttact
aaagtgaaatatcctccgggtacagtaacattgcaagtcctgggctctggtgttcgtggg
gcacctaagtcgctgtacatgttcaccgaccagtcttgttaccttttcaattgtggggaa
ggttctcagcgcctagcacatgaacacagatttaaactttcaaaagtagaacaaattttc
ttcacccatacatcttggggaaatgtgggaggtctgcctggaatttctctaacaattcaa
gatgtgggtgtccccaatattacactccatggagcacctggtttgggtgatttgtttgtt
gctgcttctagattcatcatcctgaaggatttacaagttaatcacatagatgcaactaac
cctgaatctacctttgaggatgctgtcatgaagatgaattacatccccattatgcccgat
gagactggaaagttgccccgttcagctacaaattctcccatcgaagaagaggacgtaacg
aactactacagccgtgaaaagggaaaccctgaggatgttcctgcagccaaacggacccgt
gtggagaaaaatggtgacatgaatccctctagcaaagccgcgctagcttacatatgccgc
ctacatcccaagcaaggtatgctaatggcggaaaaatgtgtagaatttggggttccaccc
ggaccactgtacgggcagctgaaagctggccaagatatcacccttcccaatggcaaaacc
gttctagcctctgacgtacgtagcccggatgatcctggcccagtattcgtagttgtcgaa
tgtccggacgagtcctacctggataattttgtatctgagccacaactcaggaagttgcaa
agacgtaatggagcgactgaattggattgccccaaggtggtggtccatttcactcctatc
gagttgactaggcatccgaaatatcaagaatggatgggtggttttgacgcagatgcgtgt
cacatgatgcttgggtttaccaaagatggtgaagaaaggcgaggatttggtagtttggcc
gtccatcgtatccaacatcaattgcatctcctcgattcggaaattttccctcatctgcct
tttgatttgcgagtggatggagagcctgaacattcggaagcatcggaattagactgccaa
actttgacaacgtattatctgagacctttgaagaagcttgacctatctcttgttcctatt
ctgaagcctcaagagtacgtcgatgaaagtctttctcaggagggtttcaagctcagcttg
gatgctttgaaattgacactggcagatgcagtccccatcagcaataagacttaccccaaa
ttggtctttcttggaacgggatcgtgcattccaaacaaaaccagaaacactagtgctatt
ctagtcgaattggagaaagatcgtttcatattgatggattgcggtgaaggaacctatgga
caaattgttcgtttctttggacacgaacgagcagctcaagttttatccaaccttgttggt
gtttacatttctcatcttcatgctgaccaccatatcggtctgattggtttgctccaagga
cgacagcattccatcgaacggacgaaatctgatgccggacctttgatgctcattgccccg
catcagatcaacttttggctgaagacgtatcattatagcttcgaacgcatacgacagtat
tacacgctcgttgcatgcgctaacctttttgaaggcaaaacacccgaccctgcgctcatc
accggccttaatctcaaatcaatcgtcactacacacgtccgacactgccccaatgcattt
ggcgtctcgctgacaaccgccgatggtttcaaattgacgtactctggtgacacgatgccc
tgcctcagtttgattgatataggacgtgattcggatcttctgattcacgaaagtaccatg
gaagatggaatggaagtggaggctcaaaagaagacgcattgcacaacatctcaggcaatt
gaggtgggccgttcaatgggggccaaatttactttgctgactcatttcagtcagcggtat
tccaagattccaatcttcaacgagaaatctttcgcgtccaacacgataggtgtggctttc
gacaacatgcaaattagtcccgatcgtttgcatcatttgccctacttcatcccgtcgctg
aaattgatgtttgccgatcattgcgaagagatggataacaaaacaaacaaacgcaaattg
cggcaggaacgagaagaaaaacataaacaattgcagcgatccgcccaacatttaggtaac
taa
DBGET
integrated database retrieval system
