Daphnia magna (water flea): 116933923
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Entry
116933923 CDS
T07514
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116933923
04121 Ubiquitin system [BR:
dmk04121
]
116933923
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
116933923
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116933923
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
MAP2_projctn
Motif
Other DBs
NCBI-GeneID:
116933923
NCBI-ProteinID:
XP_032797481
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Position
LG7:5922536..5925119
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AA seq
622 aa
AA seq
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MATFESDAENLDNFDGLVEEMNIEVADNIEGSSSAYVSPIWKYFEKDRRDETKAKCKICD
SFHNRSGSSTSNLIKHLKAVHKIDPGCRKVTKKVNASVNKTIVVKRKVDTELDRLYVMWL
CHDLLPFRTGESKYFQKFIAALKPDYVIPSRTKLSQCLVPELANEIQEKLVTILEQRDVA
DVVLTTDAWTSKSCDNYEALTAHFICKNFVFRSATLGIAKLDNQTADGHVKLIEKLVNKH
KGLMERVTTLTSDNAEVMKSTCRKLKISWFGCIPHTINLVVKNGLNISDCANILASIRAI
ASHFRRSAKATALLNSEQKKLKLAEHKIIRDNETRWSSVYFMLERFLEQHKAIYNVLSDL
KSDLAFPSLSDLKDLAMLRDYLKPFQEVTTVMSSEKNVTASSVIYLVTELMRHATDFSVL
HEDKYKVTAAVAASMRVSMLERGFPSYASNKILLLATILDPRYKTAGLPNDEAVQAAKGE
LFRKASLLDDSNDGIDEAVVELSSSERPKSIFDRLDENRAIANQSALICAGSRHEVESYL
TEPTIGRHEDPLQWWKARQDRYPRLSILARKALCIIVNSVPCERIFSKMGLIITDRRQRL
SHRKAGLLGFIAQNLQILSDEI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctacatttgaaagtgacgctgagaatttggacaattttgatggtttggtggaggag
atgaatattgaggttgcagacaacattgaaggctctagttcggcgtatgtaagccctatt
tggaaatactttgaaaaagaccgtagagatgaaacgaaagcgaagtgcaaaatttgcgac
tcatttcataatcgctctggtagttctactagtaacctgattaagcatttgaaagcagtg
cataagatcgatcctggttgtagaaaagtcactaaaaaggtaaacgcatcggtcaataag
acaatcgtggtaaagaggaaggtggataccgagctggatcgtctctacgttatgtggctt
tgccacgatcttttgccatttcgaaccggggaaagtaaatattttcagaagttcattgct
gctcttaagcctgactacgtaattccatcaagaactaaattaagtcagtgcctggttcca
gaactagcaaatgaaattcaagaaaaacttgttacgatccttgaacaacgggatgttgca
gacgttgtattgacaactgatgcttggacgtctaagtcttgtgacaactatgaagctcta
acggcccattttatttgcaaaaatttcgtgttcagatcggctacgttgggaatcgcaaaa
ctcgacaatcaaactgctgacgggcatgtaaaactaatagaaaagcttgtaaacaagcat
aaaggactaatggaacgggtaaccacattaacttccgacaatgccgaagttatgaagtcc
acatgtagaaaacttaaaattagctggtttggttgtatccctcatacaattaatcttgtt
gtcaaaaatggtcttaatatttctgattgtgcgaatattctggcttcgattcgtgcaatt
gcttctcattttcgcaggagtgcaaaagcaactgctttactgaacagtgaacagaaaaaa
ctaaaactggctgaacataagatcataagagacaacgaaacccgctggtcttctgtttac
ttcatgctagaacgtttccttgaacagcacaaggcaatttacaacgtcctaagtgatctg
aagtctgaccttgcttttccgtccttatctgatttgaaagacctggccatgttaagggac
tatctgaaaccttttcaagaagttactacagtaatgtcgtcagaaaaaaacgtaactgca
tcgtcggtgatttatctcgtcactgaacttatgcgtcatgccacagatttcagtgtcttg
catgaagacaaatacaaagtgaccgcagctgttgcagcttccatgagggtttcaatgcta
gagcgtggatttccttcgtatgcgtcaaacaaaatacttcttcttgctactatactagat
ccccgttacaaaactgctgggcttccgaatgacgaagcagttcaagcagcaaaaggcgag
ctatttcggaaggcatctctgctcgacgatagcaacgatggcattgatgaagctgtagtc
gagttatcatcaagtgaacgccctaaatcaatttttgatcgtctggatgaaaatcgcgct
attgctaatcaatctgccttaatttgtgctggatctcgccacgaagtagaatcctatctt
actgagccgactattgggaggcacgaagaccctttgcaatggtggaaggcacgccaagat
cgataccctcgcctttctattttagcaagaaaagcactttgcataattgtcaactctgtt
ccgtgtgaacgcatattttctaaaatgggattaatcataacagatcgccgtcaacgcctt
agtcatcgaaaggcaggtcttctcggttttatagcccaaaatttgcaaattctttccgat
gaaatataa
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