Daphnia magna (water flea): 116934298
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Entry
116934298 CDS
T07514
Name
(RefSeq) protein transport protein Sec24A
KO
K14007
protein transport protein SEC24
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116934298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116934298
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116934298
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
116934298
NCBI-ProteinID:
XP_032797756
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Position
LG1:complement(12375159..12380348)
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AA seq
1021 aa
AA seq
DB search
MASQPPVQYNLMSPSIPNATGTSQPPLLQRPITSNGIGQPSAGSRFPVPATSNSVPVSAT
TNSQWARPPVSSQFAPSTMSQPSFTAAGHQQCNPAIFGQDSPRPVLETQSSGRPPSSSSG
PPLNNYQSGQPIINGNLGPPLANGVRTPTAYSGVNYATPATSSMGYSSPGVPPQYASQNF
MPPQLHYGSGPPMGRPAGPPVPQQQYSTGYPSYSSASGQLPPISGIHTQQLSYPAAPVLP
NAPVNQFQNFNSSIDKMASQMNTMSVTQTGFDKIWGHENVDLLQVRNILPAQGVETPRIR
LRQEHLNNVHCSMDIFRCTLTKIPETNSILQKSRLPLGVLIHPFKDLTQLPVIQCQTIVR
CRSCRTYINPFVYFVDQRRWKCNLCFRVNDLPDEFQYDPMSNSYGDPTRRPEIKNATIEF
IAPAEYMLRPPQPPVYLYLLDVSHVAAETGYLKLFCDVLLEELEKIPGDSRTQIGFITYA
SSVQFYNLAENLNQPHQLVVSDIEDIFLPCPNDLLVNLNESKRLVIELLEQLPLRFNNTA
DCNSALGAALQAAYKMVSPTGGRITVFQASLPNIGPGALKPREDPNQRAAKDVPNLNAAT
DFFKKFALDCSGQQVAVDLFLLGGQYMDIASLSCASKFSGGCMYHFPSFHYVHNLPQVER
LEHSLRRYLTRKIGFESVMRIRCTHGLSIHTFHGNFFVRSTDLLSLPNINPDAGFGLQVS
IDENLSEVQNICFQAALLYTSSKGERRIRVHTMCLPIASTVADVIQSADQQCIVGLLAKM
AVDRSLHSSISDARDAIVNVCVDVLSAYKATMSSAPSGLYAPSNLRLLPLYLAALLKSVA
FRTGQSTRLDDRVFAMNQLKVLPLSQLILSVYPDMYAIHNLHDQGAISQGEMVIPQPPRI
HLSAEMVDSTGAYLLDTGDVIYLYVGRNIHPAFIENVLGSSSFQSLPEQMFELPELETAE
SERLRNFLVHLQNQRPYPAVLQLIREDSQIRHLFSSHLVDGRTESSLSYYEFLQHLKNQI
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagcctcctgttcaatataatctgatgtcgccatcaatacctaatgcgaca
ggaacttcccaaccaccattacttcaacgtccaataacaagtaatgggattggacaacca
tcagctggttcccgatttccagtgccagcaacatcaaattctgttcctgtgtcagcaacc
acaaattcacagtgggctagacctcctgtttcaagccagtttgctccaagtacaatgagt
caacccagttttactgcagcaggccatcaacagtgtaacccagcaatttttggacaagac
tcaccaaggcctgtgttagaaacacagagctcagggagacctcccagcagttcttcaggt
ccccctttgaataattatcaaagtggtcagcccatcattaatggtaacctgggtcctcca
ttggcgaatggtgtcagaaccccaactgcttattccggtgttaactacgctactcctgcg
accagcagcatgggatactcctcacctggagtaccccctcaatatgcttcacaaaacttc
atgccgccacagttacactatggatcaggccctccgatggggagaccagctgggcctcct
gtacctcagcaacagtatagtactggatatccaagttactcatcagcatctggtcaatta
ccaccaatttctggtattcacactcagcagctaagttatcctgctgcacctgtgttacct
aatgctccagtcaaccaatttcaaaattttaactcatcaatcgacaagatggcatcccag
atgaataccatgtcagtaactcaaacaggatttgacaaaatttggggtcacgagaatgtg
gatttactccaagttcgaaatattttgcctgctcaaggcgtggaaactccccgtatccgc
cttcgacaagaacatttgaataacgtgcactgcagcatggatatctttcgctgcactttg
acgaaaattcctgagacgaattccattttgcaaaaatctcgcctcccgttgggagtgttg
attcatcccttcaaagacttgacgcaattgcctgtaatacagtgtcaaactatcgttcgc
tgtcgatcttgtcggacgtacatcaatcctttcgtttattttgtggatcagcgacgatgg
aaatgcaatttgtgcttccgagtaaacgacttgcctgatgagttccaatatgatccgatg
agcaacagttacggtgatccaacgcggcgccctgaaattaaaaatgccaccatcgaattc
atagctccagcagaatacatgcttcggcctccccagcctcctgtctacctttatcttttg
gatgtcagtcacgtagcagctgaaacaggctatttgaagcttttttgcgatgttcttttg
gaagaactggaaaaaattccaggtgatagcagaacgcagattggtttcataacctatgcc
agtagcgttcagttctataatctcgccgagaacttaaatcagccacaccaattggttgta
tcagacatcgaggatatctttctaccatgtcctaacgatttgttggtcaatttgaatgag
agtaagaggctggtaatagaactcctagagcagcttcctttaagattcaacaacacagca
gattgtaatagtgccttgggagctgcgttacaggctgcttataaaatggtaagtcctact
ggcggtcgtataacagtgttccaagcttccttgcctaatatcggaccgggagcgttgaag
cctagagaagatccgaatcaacgagcagccaaagacgtgcctaatttaaatgccgctacc
gacttctttaagaaatttgccctcgattgctctggtcagcaagtggcagtagatcttttc
ttattgggtgggcaatacatggatattgcttcactgtcgtgtgcgtcaaagttttctggt
gggtgcatgtatcattttccgagcttccactatgtccacaacttaccacaagttgagcgc
ctagagcattcgttgcgtcgatacttgacgcgcaagatcggatttgaatccgtcatgcgt
attcgctgtactcatggcctgtcaatccacactttccacggaaacttttttgtgcgttcg
accgatttattgtctttaccaaatattaacccggacgcaggatttggtctacaagtttca
atcgacgaaaacttaagcgaagtccaaaacatatgctttcaggcagcacttctttacacc
tcaagcaaaggcgagcgacgtatacgagtacacacgatgtgtttgcctatcgctagcacg
gttgcagacgtaattcagtcagcagaccagcagtgcattgttgggttgttagctaaaatg
gccgttgaccgttcgctgcattcgagtatcagcgacgcgcgagatgccattgtcaatgtt
tgtgtggacgttctatcagcctataaggcaaccatgagctctgcaccatcaggactgtat
gcgccttccaacctaaggctgttgccactatatttggctgctctattgaaatcggttgcc
ttcagaaccgggcagagcacgcggttggatgaccgtgtttttgccatgaatcaattaaaa
gtgttgcctttatcccaactaattctctccgtttacccggatatgtatgcgattcacaat
ctacatgatcaaggagctataagtcagggagagatggtgatacctcaacctccgcgtata
catctttcagcggaaatggtcgattcgactggagcttatctacttgacaccggggatgtc
atttacctgtatgtcggccgcaatattcatccagctttcatagaaaatgtactcggatca
tcgagtttccaatctttgccagagcaaatgttcgagttgcccgaactagaaacagctgaa
tcagaaaggcttagaaactttttggttcatcttcaaaatcagagaccgtatccagctgtg
ctacagctgatcagggaagacagtcaaattcgacacctgttctctagccacctcgttgac
ggtcgaactgaatcttcgctttcatactacgagttcttgcagcatctaaagaatcagata
aaataa
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