Daphnia magna (water flea): 116934496
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Entry
116934496 CDS
T07514
Name
(RefSeq) nucleolar transcription factor 1-A
KO
K09273
upstream-binding transcription factor
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116934496
03021 Transcription machinery [BR:
dmk03021
]
116934496
Transcription factors [BR:
dmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116934496
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116934496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SpoIISA_toxin
Carbam_trans_N
Motif
Other DBs
NCBI-GeneID:
116934496
NCBI-ProteinID:
XP_045031132
LinkDB
All DBs
Position
LG6:7395826..7400461
Genome browser
AA seq
785 aa
AA seq
DB search
MARKVKASKKIELPASPPEEQPFSPLVTDEDEDDEDREVDEEEEKEDDDEGVVDEEDEDE
DADAGENADQDEIEEEKNGAPLSWPKIDTLELLERIRKACPKDDVMKYDSRVNHVDWEAI
KFGEYSSEQCKTRWLDIQAHLRHYRLLSEVLTDAETWVDRPWYNFNKGGKNNQKHPDQPK
KPLTSYMLFYMEQKDAVLEKQPGLGMRELTKIIAKMYHELNDRKKQKYSEMAEKEKEAYL
EKMRKFTEAHPDYVVPKSKQSSKPVPPKLPTPFKLFSDDKMAKLLAQGMSVTEAKERCRE
AYKELKDKQKLKWIYQALEHEIKYNEEMENFKAKYPDVEASAKKLSLLTKDELQIKHKHE
GKPDKPPNSGYSLFSRKLLSSNALKQFESKERMTEISRLWKELSDDEKEAYNAKATQLNH
LYKMKFASYLETLTPEQRNAELISSVSKNMKRVAGKKGEEEPTDKKIKISLPHGLELSDA
ESDGEVGSDEDDFELPPKAAIQKPNSSLQMFCDTNMEKYTTKHPKLTKQELTRLMAKEFA
KLSEEKKKIYGNMAQKSKNEMPSSAKKEASTAPKAKAKAAKATPNSKKAAAKSVASAAVS
PSKESTAKNELQASKSPSKMKPSLNANAKSSAQKESSKTPKVPLWAANQMLFKTEKAKEP
PKVPESAAAYYALTQHSKGEDVSSAEIDNLWGKVTEKQKTKYIQEHKKKLKEYVANFEKF
VRLLNKEELIAYRAFMKKRELAQKAAKEAKTDESSDEESDPGSSNEDEVSGASTEDEEQM
SSEED
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaaagttaaagcttccaagaaaattgaattgcccgcgagtccccctgaagaa
caaccattttctccgctggttacagatgaggatgaggatgacgaggacagagaagtagat
gaagaggaagagaaagaggatgacgatgaaggagttgttgacgaagaagacgaagatgaa
gacgcagacgcaggtgaaaacgcagatcaagatgaaattgaagaagaaaaaaatggagct
cccttaagttggccaaaaatcgacactttggagcttttggaacgcattcggaaagcttgt
ccaaaagacgatgtaatgaaatacgactctcgcgtaaaccacgttgattgggaagccatt
aagtttggggaatattcttctgaacagtgtaaaactcgctggctcgatattcaagctcat
ctaagacactatcggcttcttagtgaagttttaacggatgctgagacatgggtagatagg
ccttggtacaatttcaacaaaggaggaaagaataaccagaagcatcctgatcagccgaag
aaacctctcacatcctacatgctgttctacatggaacaaaaagatgcagttttggagaaa
caacctggtctcggaatgagggaactgaccaagatcattgcaaaaatgtatcacgaactt
aatgaccgaaagaaacagaaatattctgaaatggcagaaaaagaaaaagaagcgtacttg
gaaaaaatgaggaagttcactgaggcccatcctgactatgtcgttcctaaatcaaagcaa
agctctaagcccgttccaccaaaacttccaacgccatttaaattgttcagcgatgacaaa
atggcaaaattattggcccaaggaatgtcagtaactgaggcaaaagaacgttgcagagaa
gcctataaagaactgaaggataagcaaaaattgaaatggatttatcaagctctagagcat
gaaatcaaatacaacgaggagatggaaaactttaaggcgaagtacccagacgtggaagct
tcagccaagaaactgagtcttcttaccaaagacgaactgcagattaaacacaaacatgaa
ggaaaaccagataagccacccaattctggatacagtttgttttcgagaaaactgctatca
agtaacgcgctgaagcagtttgaatcaaaggagagaatgacagaaatttcaagactatgg
aaagaactcagtgatgatgaaaaagaagcgtacaacgctaaagccacacagttgaaccac
ttgtacaagatgaagtttgcttcttatcttgagacattgacacctgagcaaagaaatgca
gaattaataagttccgtaagcaaaaacatgaaaagagttgctggtaaaaaaggagaagaa
gagccgacggacaaaaagattaaaataagtctaccacatggtttggagctttcagacgca
gaaagcgatggcgaagttggtagtgacgaggacgactttgaacttcccccgaaagcagca
atccaaaaacctaactcttcgctgcaaatgttttgcgataccaatatggagaagtacacc
accaaacaccccaaactgacaaaacaggaactcaccagattgatggccaaagaattcgct
aaattaagcgaagaaaaaaaaaaaatttatggaaacatggctcagaagtcaaaaaatgaa
atgccatcatctgctaaaaaggaagcaagcacggcgccaaaggctaaggccaaggcagca
aaagcaacaccaaattcaaagaaggcagccgcaaaatcagtcgcctctgcagccgtttcg
ccatccaaggaatccacggcaaagaatgaattacaagcttccaagtcaccttcaaaaatg
aaaccatctttaaatgccaatgcaaaatcctcggcacaaaaggaatcttcaaagacccca
aaagtcccattgtgggctgcaaatcaaatgttgttcaagaccgaaaaggcgaaagaacca
ccgaaagtaccagaaagcgctgctgcttactacgcgcttactcaacattccaagggcgaa
gatgttagctcggctgaaattgacaatttgtgggggaaggtgacagaaaagcaaaagact
aaatatatacaggaacacaagaagaagctgaaggaatacgtagcgaatttcgaaaagttt
gttcggttgttgaacaaagaggaacttatagcttaccgggcgttcatgaagaaacgcgaa
ctggctcagaaggcggccaaagaagctaaaacggacgaaagttctgacgaagaatctgat
ccgggtagttcaaatgaggacgaagtaagtggcgcaagcacagaagatgaagagcagatg
tcttcggaggaagactga
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