Daphnia magna (water flea): 116934574
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Entry
116934574 CDS
T07514
Name
(RefSeq) alpha-actinin, sarcomeric isoform X1
KO
K05699
actinin alpha 1/4
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04517
IgSF CAM signaling
dmk04518
Integrin signaling
dmk04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116934574
04518 Integrin signaling
116934574
04519 Cadherin signaling
116934574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116934574
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
116934574
04147 Exosome [BR:
dmk04147
]
116934574
Membrane trafficking [BR:
dmk04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116934574
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116934574
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116934574
Exosomal proteins of colorectal cancer cells
116934574
Exosomal proteins of bladder cancer cells
116934574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
116934574
NCBI-ProteinID:
XP_032797953
LinkDB
All DBs
Position
LG1:complement(12498396..12509911)
Genome browser
AA seq
901 aa
AA seq
DB search
MVEMTTMMDANGVYMEQEEEWEREGLLDPAWEKQQRKTFTAWCNSHLRKAGTGIDNIEDD
FRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDG
NTKMTLGMIWTIILRFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLA
FCALIHRHRPDLIPNYNQLSKDNPLENLNLAFDVAEKYLDIPRMLDPEDLINTPKPDERA
IMTYVSCYYHAFQGAQQAETAANRICKVLKVNQENERLMEEYERLASDLLEWIKRTLPWL
ESRQTDNSLAGVQKKLDEYRQYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYMPTE
GKMVSDIANAWKGLEGCEKSFEEWLLSEMMRLERLDHLAQKFKHKSDIHQGWTQGKEEML
SSQDFRSCRLPELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNALDYHDTASVNARCQ
LICDQWDRLGSLTQSRRQALEEAERVLEKIDQLHLEFAKRAAPFNNWLDGAREDLVDMFI
VHTMEEIQGLLDAHEQFKATLGEADKEYQSIVGLVQQVESIAGQHSIPGGLDNPYTSLTA
KDESSPKDITSKWAEVRQLVPQRDGTLQAELRKQQNNELMRRQFAEKANSVGPWIERQMD
AVASIAMGMQGSLEDQLVRLKEYEQNVYAYKSHMEELEKLNQGIQESMVFENRYTQYTME
TLRVGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRSSFNHFDKNRVGHLKPDEY
KSCLVSLGYSLGKDKQGDIDFQRIMAIVDPNNSGYVLFDAFLDFMTRESTDSDTAEQVID
SFRILAGDKPYILPDELRRELPPDQAEYCIQRMQPYKGPDGIPEALDYMSFSTALYGESD
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaatgacgaccatgatggatgccaacggcgtctacatggagcaagaggaagaa
tgggagcgagagggattactcgatccagcttgggaaaaacaacaacgaaagacttttaca
gcctggtgtaattctcacctgcgtaaagctggcactggaatcgataacattgaggacgat
ttccgcaacggcctcaagttgatgcttctacttgaggtcatctcgggtgaaacgttgccc
aagcccgaccgcggaaagatgcgtttccacaagatcgccaacgtcaacaaggccctggat
ttcatcgccagcaaaggcgtcaaactcgtttccatcggagctgaggaaatcgttgacggc
aacaccaagatgacgttgggtatgatttggaccatcattttgcgtttcgccattcaagac
atttcggtcgaagagatgacggccaaagagggcttgttgctctggtgccaacgtaagacg
gctccctacaagaacgttaacgtccagaatttccatctgagcttcaaggatggccttgct
ttctgtgccttgattcaccgccaccgtccggatctaatacccaactacaaccagctgtcc
aaggataatcctttggaaaatcttaacttggcttttgatgtggctgagaagtatctggac
atccctcgcatgttggaccctgaagatctgatcaacaccccaaaaccggatgagcgtgca
atcatgacgtacgtttcgtgctactaccacgccttccagggtgcccagcaggcggaaacc
gcagctaatcgcatctgcaaagtgctcaaggttaaccaggagaatgagcgcctcatggaa
gagtacgagcgtttggccagcgatcttctggagtggatcaaaagaactctgccttggctc
gagtctcgccaaacggacaactcgttggccggcgtgcaaaagaaattggacgagtaccgg
caataccgccgcaagcacaagcctccccgtgtcgaacagaaggccaagctggaaaccaac
ttcaacacgctgcagaccaagttgcgtctgtccaaccgacctgcttacatgcccaccgaa
ggcaaaatggtttcggatatcgccaatgcttggaaaggtttggaagggtgcgagaaatca
tttgaggagtggctcctctctgaaatgatgagactggaacgtttggaccatttggctcaa
aagttcaagcacaaatcagacatccatcaaggatggactcaaggcaaagaagaaatgctt
tcttcccaggatttccgttcgtgtcgcttgccggaattgaaggcactgaagaagaaacac
gaagccttcgagagtgacttggctgctcaccaggatcgcgtcgaacaaatcgctgccatc
gctcaagaactcaatgcgttggattaccacgacacggcttcggttaacgcccgctgtcag
cttatttgcgatcaatgggatcggttaggatcactgactcaatcgcgtcgccaagctttg
gaggaggccgaacgagtgctcgaaaagattgatcaacttcatttggaatttgccaagagg
gctgcgcctttcaacaactggttggacggagcccgcgaagacttggtggacatgtttatc
gtccacacaatggaagagattcaaggcttgctcgatgcccacgaacaattcaaagccacc
ctgggtgaggcggacaaagaatatcaatcgatcgttggcctggttcaacaagttgaatcg
attgccggtcagcacagcatccccggtggactggataatccttacaccagtctgacagcc
aaggatgaatcatcacccaaggacattacttctaaatgggcggaagtccgtcagttggtt
ccacaaagggacggcactcttcaagctgagctgcgtaaacagcagaacaatgagcttatg
cgccgccagtttgccgaaaaagccaactcggttggaccgtggatcgagcgccaaatggac
gccgtggcttctattgcaatgggcatgcagggctctttggaggatcaattggtacgtttg
aaggaatacgagcaaaacgtctacgcctacaagtcgcatatggaagaactggagaagctc
aaccaaggcatccaagaatcgatggtctttgaaaaccgatacacccagtacaccatggaa
acgctgcgagtcggctgggagcaattgctcacctctatcaatcgcaatatcaacgaagtt
gaaaaccagattctgacacgcgattcgaaaggtatcacccaagaacagttgaacgaattc
cgaagctcgttcaaccacttcgataagaaccgtgtcggccacctgaagccggacgagtac
aagtcatgtttggtcagcttgggttattcgctcggcaaggacaagcaaggagatattgac
ttccaacgtatcatggctatcgttgatcccaacaacagcggctacgtcctatttgatgcc
ttcctcgattttatgacgcgagagtccaccgactcggacacagccgaacaggtgattgat
tcgttccgcatcttggccggtgacaaaccttacatcttgccggatgagttgcgtcgcgaa
ctgccacccgaccaggccgaatactgcatccaacgcatgcagccctacaagggcccggat
ggtattcctgaagccctggactacatgtcattctccacggcactttatggcgagtccgat
ctgtaa
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