Daphnia magna (water flea): 116935195
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Entry
116935195 CDS
T07514
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116935195
03036 Chromosome and associated proteins [BR:
dmk03036
]
116935195
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116935195
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116935195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
116935195
NCBI-ProteinID:
XP_032798437
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All DBs
Position
LG1:complement(9728340..9733507)
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AA seq
913 aa
AA seq
DB search
MNSFVTGSDIATGSGHQQPSKRKLSPVKEVRNTILHKPVINGSPVAKKKFVPTIPPTRSK
KTSDSPSLKERKPIQPYKGIPRRGGHGRGTKNGMNNLRQPHQRRPVNHGNRPVAQYQKPV
LVQMEGSLFGQGVAMEKGKHASKLQNQATLDPVLNALSAVDRFEDLQNNNLSTRLLKSQL
LIPQSSSADSKSPESQLESNQLILKRDSQIHNEDQVVVNQKLSEKLKFHQVEGVKFMWNA
CFRTSTSAGCVLAHCMGLGKSLQVVTLTHTVLTNAICQVNRVMVVCPLSTVLNWENEFRI
WLPGDTFTTLNVCELASSKTSKTRETKIKKWLNIGGVLILGYEMFRTLTKEKKKLTEQDE
VFRQALVDPGPDVLICDEGHLLKNEDSEIYKAMNQICTRRRIMLTGTPLQNSLFEFYTMV
QFVKPGQLGTKAEFGKRFVKPLEKGQAVDSTPEDVRVMKRRALILHKMLENIVQRFDSNV
LAPFLPPKYEYVVSIRMSELQIRLYLYYLENHTKGGSIQPSGNQGESAGLFSDFQQLARV
WTHPKALLLACNRPDSRNSTRHAVSKISSSGEGKAKKNAKNDDDDDYLMRTEEQIFGEDV
CMQDPVDQALTSSSSPWWSDLISENEINNIEHSGKFVLLMDILRECELIGDKLLVFSQSL
TSLDLIEEFLAIEDFKNQIRSTNETNGKVVGGTWNINTDYFRLDGSTSSEQRLKWCRAFN
DPQNPRSRLFIISTRAGGIGINLVGANRVIIFDASWNPSHDLQSVFRVYRLGQKKPCYIY
RFVAQGTMEEKIYYRQVAKLSLSRRIVDEEQIDRYFGSNDLTDLYTFNADGQFSLPASIQ
ERDDSSLLDDNLLAGVAVRLKEWVGGYQAHDSLLQNRPEEYLEDSEQQAIWKIFQVEKEK
ETSLTQASSQITL
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtttgttacaggttctgatattgcaacaggcagtggacatcagcagccatcg
aagagaaagctttcccctgtaaaagaagttagaaatactatattgcataaaccagttatc
aatggtagcccagttgcgaagaaaaaatttgttccaaccatcccaccaactcgttctaag
aaaacatctgattccccatcattgaaggaaaggaaaccaattcaaccgtacaagggaatt
cctaggaggggaggtcatggaagggggactaaaaatggaatgaataatttgaggcagccc
catcagagacggccagtaaaccatggcaacagaccagttgcacaatatcaaaaaccagta
ctcgttcagatggaaggaagtctgtttgggcaaggggtggcaatggaaaagggaaagcat
gcatccaaactacaaaatcaagctaccctagaccctgttctgaatgcactcagtgcagtt
gacagatttgaggatttacaaaataataatttatcaacccgactgctaaaaagtcaacta
ctgataccacaatctagctcagctgattccaaaagtccagaatcacagctggagagtaat
caactgattttgaagagagacagtcaaattcacaatgaagaccaggtggtggtgaatcag
aagttgtcagaaaaactgaaatttcaccaagtagaaggtgtaaagtttatgtggaatgca
tgtttcagaaccagcacaagtgctggatgtgtgcttgcacattgcatgggtttaggcaaa
agcttgcaagttgtaactttgacccatactgtacttactaatgctatatgtcaggtaaat
cgtgtaatggtggtgtgtccacttagcacggtcttaaactgggaaaacgagttcaggatc
tggcttcctggtgacacattcacaactctgaacgtttgcgaattagctagcagtaaaacg
agtaaaacgagagaaacaaaaattaaaaaatggctgaatatcggaggagtattgattttg
gggtatgaaatgtttcgaacacttaccaaagagaaaaagaagcttactgagcaggacgag
gtatttcggcaagccttagttgatccgggtccggatgtacttatttgtgatgaaggacat
ttattgaaaaacgaagattctgaaatttacaaagccatgaatcagatttgcactcgacgc
cgaattatgctaactggcacacctcttcaaaatagtctgttcgaattctatacaatggtt
cagtttgttaagcctggacaactgggtacgaaagcagaattcggaaaacgttttgtaaag
ccgttggaaaaaggacaggcggtcgactccaccccggaagatgttcgtgtcatgaaacgg
cgagctcttattcttcataagatgcttgaaaatattgttcagcgttttgacagcaacgtc
cttgcaccctttttaccacccaaatatgaatatgttgtatccataaggatgtcggagctc
caaatccgcctttacctttattatttggaaaatcacactaaaggagggagtatccaaccc
tccggaaatcaaggtgaaagtgctggattgttcagcgactttcagcagcttgcccgagtt
tggactcatccaaaggctttgcttttggcatgtaatcgtccggattcaaggaactcaact
cgacatgctgtttcaaaaatttccagtagtggtgaaggaaaggcgaaaaaaaatgccaaa
aacgacgatgacgatgattacctcatgaggaccgaggaacaaattttcggcgaggacgtg
tgtatgcaagatccggttgaccaagctttaacgtcgtccagcagtccttggtggtcagat
ttaatctcagaaaacgaaattaacaacatagaacacagtggaaaatttgttctgctgatg
gatattcttcgggagtgcgagctgattggtgataaattattggtcttcagccagtcgctc
acaagcctagatctgatagaagagtttcttgcaattgaagatttcaaaaatcaaatcaga
agcactaacgaaaccaatgggaaggttgttggcggcacgtggaatatcaatactgattac
tttcgactggatggctccacgtcttccgaacagcgtcttaaatggtgccgagcgttcaat
gacccccaaaatccccgttcgcgtctgtttataatctcaactagagctggcggtataggc
ataaatttggtgggagccaaccgcgtcataatttttgatgcttcatggaacccgtcacat
gatcttcaaagtgtcttccgggtttaccggttaggacaaaagaagccgtgttacatttat
cgcttcgtagctcagggaaccatggaagaaaaaatctattatcgccaggtagccaaactc
tcactatcaaggcgtattgttgacgaggaacaaatcgatcgttacttcggctcaaacgat
ttgactgacctctatacatttaatgccgatggccagttttcgttaccggcttcaatacaa
gagcgtgatgactcttctcttcttgacgacaacctgttggctggagtcgcagttcgactg
aaagagtgggttggtgggtaccaagcacacgattctttgcttcagaatcgtcctgaagaa
tatctcgaagacagtgagcagcaagccatttggaaaatatttcaagtagaaaaagaaaaa
gagacttcgttgacgcaagcaagctcgcaaataactctgtga
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