Daphnia magna (water flea): 116935977
Help
Entry
116935977 CDS
T07514
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116935977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116935977
Spliceosome [BR:
dmk03041
]
Common components
Common spliceosomal components
SR proteins
116935977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
116935977
NCBI-ProteinID:
XP_032799086
UniProt:
A0A0P5VVJ2
LinkDB
All DBs
Position
LG8:3446363..3450595
Genome browser
AA seq
381 aa
AA seq
DB search
MGTRVYIGGLPYRVKERDIERFFRGYGKLREVLIKNGYGFVEFEDYRDADDAVYELNGKE
LCGERVTVERAKGSPRARGRGSSGGSDSGRSPRNGRDHGRSGFRNSSNSRSGGKGGGDNA
PPRYGPPTRTDYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSD
LKTAIEKLDGTDLNGRRIKLVEDKDSGRRGSRRRSRSRSSSRSRSRSRSRRRSRSRSRSK
SRSRSKRSGSKSRSRSKSRGRSKSKSKSRSPRKSRSKSRSRDKSVDRSKSKSLSHSPRKS
RSKSRSRDKSMERDRSVSRDKSVDRAGSKQSRSKSRERSHSRSRSRSVSRSRSASGSPRR
DERDDDEKMDNGHRSSPDHRD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcgcgtgtatattggtgggttgccgtacagagtgaaggagagagacattgag
cgttttttccgtggttatggaaagctacgagaggtcctaattaaaaatggctacggtttt
gtggaatttgaagattaccgtgatgcagatgatgctgtttacgaactgaatgggaaggaa
ctgtgtggtgaaagagtaaccgtggagcgagccaaggggtcgccgcgggcacgtggccgt
ggatcatctggtggatctgatagtggccggagtccccgcaatggccgcgaccacggccga
tctggtttccgaaattcctccaactcgcgatcgggaggaaagggtggtggcgacaatgca
cctccgagatatggtccacctacgaggacagattaccgtttggtggttgagaatttgtcg
agtcgagtcagttggcaggatctcaaagattacatgagacaggctggtgaagttacttac
gcagatgcccataaacaacatcgcaacgaaggtgtggttgagtttgcatcatactccgat
ttgaagacggctattgagaagctggatggaacagacttgaatgggaggcggattaaactc
gtcgaagacaaagattcgggcaggcgcggttctcgtcgtcgttctcggtcccgttcatca
tcgcggtcacgctctcgttctcgctcccgtcgtcgttctcgctcaagatctaggagcaag
agccgcagtcgttcaaagaggtccggaagtaaaagccgaagccgctctaagtctcgtgga
cgctccaagtccaagagcaagtcccgttcgccccgaaagtctaggtcaaagtccaggtcg
cgtgacaagtcggtagacaggtcaaagagcaaatccctttcgcattcgccaaggaaatcc
cgttccaagtcaaggtctcgcgataagtctatggaaagagatcgctctgtatcacgtgac
aaatctgtggatcgtgctggatcgaaacagtcgaggagcaagtcaagggagagatctcat
tctcgatcccgttcacgttcagtgtcccgcagccgaagtgccagtggtagccctcgtaga
gacgagcgtgacgatgacgagaaaatggataatgggcacagatcaagccctgatcatcgc
gattag
DBGET
integrated database retrieval system
