Daphnia magna (water flea): 116936114
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Entry
116936114 CDS
T07514
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116936114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116936114
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116936114
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
HECT type E3
116936114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
iPGM_N
Motif
Other DBs
NCBI-GeneID:
116936114
NCBI-ProteinID:
XP_032799205
LinkDB
All DBs
Position
LG3:complement(5483668..5488398)
Genome browser
AA seq
1092 aa
AA seq
DB search
MKFPFLRNSHELVKDVCSFDSLLQNLIIEEPITATKKYCTRTNIVIFEMFSFEGEYRRKP
VQSLGGASKHSQRDIFLQRTQLERQKREDLRRQNQSAVIIQAFFRGCRARSLQKHIQRQE
FETVQAAHLQNVDLQLLTSLIKHLEFFFDKEKDANKLIWLSQMVIKNSSNIMKQCQTERQ
FTFTLAQFLSLTLCYICNTIHSSTGESKGSHWRVLEIFLNAEGWSKIVGIQSADMILGSI
FFSLSQKGYFTRLRQIIDAKVPPLVEPTTRAPNPLSGCLLDFLIQPIEFACGTLDMSHRN
TIVKSFRQEFLEPAYSEPIINFILPCLTQNNYKIPLLCMLENNEVCGRNPWLLHSVLVLA
DRHPELKHDRVLSVYVATVSRLSGCLQFMHTAEVEEDNDDSDEEDMKTNLFKAAEHDIMT
RCCEILNNINTVNVLVSALRIPGVLPDLCIIAHNLLLSDRLALHKCRLLYTLAFKPCYLQ
QLLVHIKSEKQISLFGSSDTSLILLLAKGVHLTPSESQRIVPVLDVFCSLFSHLLVTLDD
SEFYNESDPVNGAMPFKLFEVVELASTLRDVCLGLVELAYPDTRPSTSFNFIKARTSTGS
SEEDTRIWMHLFKSTVNLVSQLHTRDTRRPFCQSGLWVTGRIALPLERNGQVSLRRQGRL
QRPFRAIRPLTRNEIEEEGNSMLSTREVRTLAILREIPFVFSFTDRVKMWQQWILNDKMQ
QQGEANFLRGPSIQVMIRRNYIYEDAFDKLSLENEPNLRWKLRVQLTNAVGLDEAGVDGG
GIFREFLSELLKTSFDPNRGFFRLTHDNLLYPNPGVAVLVSDFPAHYYFIGRMLGKALYE
NLLVELPMADFFLSKIIGQASASLDVHHLASLDPVLHKNLLYLRHYDGDVTELGLDFTIV
SSELGETKVEELKPNGSNIPVTSSNRIEYIHLVADYKLNKQIRLQCNAFRQGLANVIDIE
WLQTFSYRELQVLVSGAYTPVDLEDLKQHTHYAGGYTSTHPVIQGFWRVVSKFDDSGKRH
LLKFVTSCSRPPLLGFKELDPPFCIQNAGTDDRLPTASTCMNLLKLPEFHDENVLRDKLI
YALQSGAGFELS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttccttttctgaggaattcacatgaattagtgaaagacgtctgcagcttcgac
tctttacttcaaaatctcataatagaagagccaattacggcaacgaaaaaatattgtacg
agaaccaatattgttatttttgaaatgtttagttttgagggagaataccggagaaagccg
gttcaaagtttgggtggagcatcaaaacatagtcaaagggatatttttctccagagaaca
caactagaaaggcaaaaaagagaagatttacgacgtcaaaaccaaagtgctgttatcatc
caggctttttttcgaggttgtcgagcaagatcccttcagaagcacatccaacgtcaagag
tttgaaactgtgcaagctgcccatcttcaaaatgttgacctgcaactgttaacatctttg
attaaacaccttgagttcttctttgataaagagaaagatgccaacaagcttatctggtta
tcccagatggttattaaaaactcatctaatataatgaagcaatgccagactgagaggcaa
ttcacatttacccttgctcaattcctcagcttaactctctgttacatatgtaatacaatt
cattcatcaactggagaaagcaaagggtcccattggagggtcctggaaatcttcctgaac
gctgagggctggagtaaaattgttggaatccaatcagctgatatgattttgggatcaatc
tttttttcattgtctcaaaaaggttattttaccaggttacgtcaaataattgacgccaaa
gtaccaccgttagttgagccaacgacaagggcacctaacccactttctggttgcctgttg
gatttccttattcagcctatagaatttgcatgtggcacgctcgatatgagccaccggaat
actatagttaaatcctttcgtcaggaatttctggaaccggcttattcagaaccaattata
aatttcattcttccatgcttgacgcagaacaattacaaaattcctttgctgtgcatgttg
gaaaataatgaggtttgtggaagaaatccctggcttcttcacagtgttctagtgcttgcc
gataggcatccggaattgaaacacgacagagtgctttcagtctacgttgccacagtaagt
cgtttgagtggatgcctccagtttatgcatacagctgaagttgaagaagacaacgacgac
tcggacgaagaagacatgaaaactaatctatttaaagctgcagaacacgacataatgact
cgctgctgtgaaatccttaataacattaatacggtaaacgtattggtatcagctctacga
atccctggtgttcttcctgacttgtgtattatcgctcacaatctgttgctgtcagatcgc
ttggcactccacaagtgcaggcttctgtatactctggctttcaaaccttgctatctacaa
cagttgctcgtccatatcaaatcagaaaaacaaatttcgctatttggttcatccgatact
tctttaattctgctcttggccaaaggtgtacatctgacgccttcggaaagtcaaaggatc
gtaccagttttagacgttttctgttcgcttttcagccatcttttagtaacattggatgat
tccgaattttataacgagtctgatccagtgaacggagctatgccctttaagctctttgaa
gtggtagaactagcttcaacgctgcgagatgtttgcctcggactggtagaacttgcttat
cctgacacacgaccaagcacctcctttaacttcattaaggcccgcacttctacgggtagc
tctgaagaagataccagaatatggatgcatcttttcaaatcgacagtaaatcttgtcagc
cagctgcatacaagagatacccgccgaccattctgccaaagtggactttgggtaactgga
agaattgctctacctttggagaggaatgggcaagtgtctctccgtagacagggtagactc
caacgcccgtttagggctatacgacccctgactagaaatgaaattgaagaggaaggcaat
tcgatgttgtcgacaagagaagtgcgtactttagccatccttcgcgaaatcccattcgtt
ttctccttcactgaccgtgtcaaaatgtggcagcagtggatcctcaatgataaaatgcag
caacagggcgaagcaaattttctacgaggcccatccatccaggtcatgatacgccggaat
tacatctacgaggatgctttcgataagctttcacttgaaaatgaaccaaatctgagatgg
aagttgagagttcagctaacaaacgctgtaggattagacgaagcaggtgtcgatggcggt
ggtatctttcgcgagttcctatctgagctactgaagacgagcttcgacccaaaccgtgga
tttttccgcttaacccatgataacttgctctaccctaatcccggtgtggctgtgcttgta
tcggatttccccgcccattactattttattggtcgtatgctgggcaaggcactgtatgag
aatctgctagtggagttgccaatggcggatttcttcctctctaagatcattggccaggcc
agcgcaagcttagacgttcatcatttggcttccttagacccagtgcttcacaagaacctt
ctttacctccgtcattatgatggtgatgtcaccgaattaggactcgatttcaccatagtg
agtagtgaattaggtgaaactaaggtggaagaacttaagccgaatggctcaaacattcct
gtcacgtcttcaaatcgcatcgaatatatccatttggtagcagactataaactgaacaaa
cagatccgcttgcaatgcaacgcgttccgtcagggtctggcaaacgtcattgacatcgaa
tggttgcaaacgtttagctatcgagaacttcaggtgttggtgtcaggtgcatatacaccg
gtcgacctggaggatttgaagcaacacacccactatgccggcggttacacgtcaacacat
ccggttatccaaggattttggcgagtcgtatctaaatttgacgattccggaaagcgacat
ttgcttaaatttgtcaccagttgctctagacctccccttctcggtttcaaagagttggat
ccgcctttctgcattcaaaatgccggtactgacgaccgacttccaaccgctagcacctgc
atgaatctactgaaactaccagaattccacgacgaaaacgttttacgagataaattgatc
tatgccctccaatctggagcggggttcgaattaagttag
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