Daphnia magna (water flea): 116936390
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Entry
116936390 CDS
T07514
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116936390
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116936390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Bromodomain
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
116936390
NCBI-ProteinID:
XP_045035338
LinkDB
All DBs
Position
LG1:3192576..3201611
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AA seq
2069 aa
AA seq
DB search
MDIKPFANQSDAPSSVTAELYFLIARLLSQGPCRNASEALQRELEIHGLLPKRIDWLGNE
HDQTYAQVCQNFSHVGSNHLLELCRRLGPLVDKEVPTNVRGVHSLLGAGRQSILRRKEDQ
VRKLHREHYVVRQNKKPRLFPHDITHPPNAVSLLFGREFTGSFDQRGIAPAKLYSRVQLF
CRTLGHLSAVYCVLFDRTGQYIFTGADDLLIKIWSVVTGRLLATLRGASAEIADLAVSCD
NSLLAAGSCDKIVRVWCLRTTAPIAVLTGHGGTITSINFCPADRGSVHYLASTSSDGSVS
FWEYVKEPGQIPKFFPRPHKFNEKIRPGQAQMLCASFSPGGMFMATGCADHHVRVYAMFG
QEGPERILEQEAHSDRVDSIQWANTGLRFISGSKDGTALIWRYERQEWRTVRLRMSCRLE
GASSATAEELSQKLKVTMVTWSRDDRYLITAVSDFSIKLWDSSTGILRKELRGHEGEAFV
LESHPYDPNVLLSAGHDGRLLIWDMSKGEVMKSFLNFIDGQGHGAVFDAKWNPSGSTIAA
TDSHGHLSIYGIGPSESFKKLPKAIFFHTDYRPLIRDAHHHVLDEQTQLAPHLMPPPFLV
DSEGNPYPPHMQRLVPGRENLKDDQLVPTVVVNANGEQEILAGVEMPVLPGAEVANNPPV
VVSPPQFVPQRTRSNIDQMIAELAHQQERQRNRPRSSTTAAVAAASGTNSSTSSVPPNSD
HSYTSRTPHTVHNRPLLVASGSTNSPRASVTPDPAFNETDGDAAQNDDSVNLSTEATASE
SLPGFSRRVIVKPLTIGQLASVKNERQGCADEEVTLFYQEVQRKSPNIFLNTSVSPGITA
LLAARSHGVSDDGWSPSRPRRGHPSRPARTYQRERNVVSSPARSRIPPVSPARRTSAIMA
PPQQPNQQHNYRTRANRTTNGTRDRIREGASDGTRERSRRVVRRVVSTDEDEEVDIEVEE
RRSSRRTSPRDEDSGDEEETRRTRSNARQRPQTRNGDALSTSDSDDSESESDLASDLLDS
DDSDSETRGSSSSSSSEYSDWTAEAGVNLEPPKRTRKKVYRRPRCLSSEEETTTASTSAQ
PANAEAEEGEGSQPGPKKRRAPIPKAGSGGLDRIPESFRPSEWLSSVVPRRQPFYPQMGD
EVIYFRQGHEQYVDAINQKKLFDLNPRSLPWSSQTIREQELVKIIGIKYEIKPPRLCCLK
LGLMDPATGVLTGESFTLKYHDVADVLDFLVLKQNYELAIQRNWQPGDRFRSIIDDLWWE
GQLETREPFQPQCPDSMFLCYRIRWDNDEVDRLSPWDLEKIDLERRPTSAGTGVPVIPAE
IAMTLYQPRAEDWPPGGDRDSECDRIAAGISQVMGLAIAEPFAAPVDLNLYPSYAYVVEY
PMDLSTIKARLENRFYRRVTAVQYDVRYVFTNACKFNEPKSDIVRSASIISDLCLEIIRN
RDSVDATALYHQLVEKYKIRDESANENATAGPSTSKGADTKRNESAPNTPNTRSKSRRNS
EHTNSDSDNDSSKAKGKNGTNSAKSKEKKINTRIAKAAALSWKQQCKDLLEMLHNSEDGG
PFREPVNILEVPDYLQVIDHPMDLLTVREQLQVSNYATPMDFTKDVRLIFENSKNFNTNK
KSRIYAMTVRLSAVFEEHIRSILASYKYRKNTGRKSKSPHSKGTKSRKGKSLAPPNAARG
IKLENGVELPRENIKIVLSRVNKGQIVVQPSSSTQTTDAGVGSVRRRILEEDEPGASNHS
VLPNGNSVHTSEDIDVKPGPSGLSASALAPTTNGLGKRGPKRRIVSDDDYEEEEDDDDDH
EATLLIPKEEESLGSPDQNKSQEDLTKGKALKKRDASAVLRSGQEESSSEDEKPISQRRR
LPMAKVPVPVVKEEDVRPSSSSSNGSSVSKGNSSNSGSLCEDGSSLRRSGRARRKPKRPF
DSEPSENEEKSPALAEGRKHQPRAVRTRNGGKRTVRYREDSEDEAKKRNSRQTGESKGNS
SRLARKVNSDDDDDDDDHENEDPRVKKQENGSIKRCSRQSAQEASKRLRTDLATSSDDDD
VPAIPTYAVSSRGRLRKIINHSHQDSYSE
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggacattaaacccttcgcaaatcaaagtgatgcaccttcatctgtgacagcagaactc
tacttcttgatcgcccgattactcagccagggcccttgccgaaatgcttcagaggcgcta
caacgggagttggagatacacgggttgttaccaaaacggatcgattggctcgggaatgaa
cacgatcaaacttatgcacaagtgtgccaaaatttttcacatgtcggtagcaaccatttg
ctagaattatgccggcgattgggtccgttagtagacaaggaggtgccgaccaacgtccga
ggtgttcactcattgctgggcgccggacgacagtcaatactccgtcgtaaagaggatcaa
gtaagaaaactccatcgtgagcactatgttgtacgacagaacaagaaacctcggttattt
ccacatgacatcactcacccacctaatgcagtttcgctgttgttcgggcgtgaatttacg
gggtcgttcgaccaacgaggtattgctcccgcgaaactctacagccgggttcagctgttt
tgtcgcacgctaggccatctttcagctgtttattgtgtcctcttcgatcggactggccaa
tacatttttacgggagccgatgatcttctgatcaaaatctggagtgttgttacgggccgc
ttgttagctactctccgtggtgcctcagcggagatcgccgatttggccgttagttgcgat
aattcgttgctggcagccggatcatgcgataaaattgttcgcgtctggtgccttcgtact
actgcccccattgcagtattgactggtcatggaggtacaatcacttccatcaacttttgt
cctgcagatagaggctcggttcactatctggcatctactagttctgatggctcggtttcc
ttttgggaatatgttaaagagccgggtcagataccaaaattctttcctagacctcacaag
ttcaatgagaaaatcaggcctggtcaagctcaaatgttgtgtgcttcgtttagcccaggt
ggcatgtttatggctactggttgcgctgatcatcacgtcagggtgtatgccatgtttgga
caagaaggacctgagcgtattcttgaacaggaagctcattctgatcgagtggattccatc
cagtgggccaatacaggccttcgtttcatttcgggcagcaaggatggtactgcgctaata
tggcgttatgaacgacaagaatggcgaactgtccgcttaaggatgagttgtcgccttgaa
ggtgccagcagtgccacagccgaggaactgagtcaaaaactgaaagtcactatggttaca
tggagccgtgatgaccgttacctcattacggctgtaagtgacttctccatcaagctttgg
gattcatcaactggtatcctgcgcaaagaactgagaggacacgaaggcgaggcatttgtt
ttggagtcccacccctacgatcccaatgtgctgttgagtgccgggcacgacggtcgtctt
ttgatttgggacatgtccaaaggcgaggtaatgaaatcgttcctgaacttcattgatggt
caagggcatggagcagtttttgacgccaaatggaacccatccggctcaacgattgctgca
acggactctcatggccatttatcaatctatggcatagggccgagtgaatcatttaagaag
ttacccaaagccattttcttccatacggactatcgaccgttaattcgggatgctcatcat
catgtgctggatgagcaaacgcagttggcgccccatttgatgcctcctcccttcctggtc
gacagcgaaggcaacccgtaccctcctcatatgcaaagattagtgcctggccgagaaaat
cttaaggatgatcagctggttcctactgtggtggttaatgcgaacggcgaacaagaaata
ttggcaggagtagagatgcctgtactgcccggtgctgaggtcgcgaataacccaccagtt
gttgtgtcccctccgcaattcgttcctcagcgtactcgttcaaacattgatcagatgatt
gctgagctggcacaccagcaggaaaggcaacgaaatcgtcctcgctcttctacaacggcg
gcagtcgctgcagcgtcaggaaccaattcttcaacttctagcgttccacccaacagcgac
cactcgtatacgtctcgaacaccccacaccgtccataaccgtccgttacttgttgcatct
ggcagcaccaattctcccagagcatctgttacgcctgatccagcatttaacgaaactgat
ggtgatgctgcccagaatgatgattccgtaaacctgtcaactgaagccactgcttccgaa
tctctgcccggtttcagccgccgtgttattgtgaaaccactcaccataggccagttagcc
agcgtaaaaaacgaaaggcaaggttgtgcggatgaggaagtgactttattctaccaagaa
gtccaacgcaagtcgcccaacatcttcctcaacacatcggtatctccgggtatcaccgct
ttgttggctgctcgttcacatggcgtgagtgacgatggttggtcgccttctcgtcctcga
cgaggtcacccatctcgtccagctcgaacctaccagcgagaacgcaatgtagtctcatca
cctgctcgttcacgtataccgcctgtttcacctgcgagacgcactagtgctataatggcc
ccccctcaacaaccgaaccagcaacataactacaggactagagctaatcgaacgaccaat
gggactcgggaccgtataagagaaggtgccagtgatggaacgagagagagaagtcgacgt
gtagttagacgagtggtttcaacagatgaagacgaagaggtggatatcgaagtagaggag
agaaggagcagtcgccgtacatcaccgagagacgaagactctggtgacgaagaagaaact
cgacgaacccgtagcaatgctcgacaacgtccacaaacccgtaacggtgatgcattatca
acaagtgattcagatgacagcgaaagtgaaagcgatcttgccagtgatctgctagatagc
gatgattcggattcagagacacgcggatcatcgtcttcgtcatcttctgaatattcggat
tggacagccgaagcaggagtcaatttggaaccaccgaagaggactagaaagaaagtttat
cgaaggccacgttgcctgtcgagtgaagaagagactacaaccgcatcaacttctgcccag
ccagcgaatgctgaagctgaggaaggtgaagggagtcagcctgggccgaagaaaagacgg
gctccgattcctaaagctggatcaggaggattggaccgtattccagagagcttccgaccg
tccgaatggttatcgtcggtggtcccacgtaggcaacctttctacccccaaatgggtgac
gaagtcatttactttagacaaggtcacgagcaatacgttgacgctataaatcagaagaaa
ctcttcgacctcaatccgcgttcacttccctggtccagtcagaccattcgtgaacaagag
ttggttaaaatcattggcattaaatacgaaattaaacctccaaggctctgctgcctaaag
ctcggcttaatggatcctgcgactggagtgttgacaggcgaatcgttcactttaaaatat
cacgatgtggctgatgtgcttgattttttggtgctaaagcaaaattacgaattagctatt
caacgaaactggcagcctggggatcggttccgtagcatcattgatgacttgtggtgggaa
ggccagttggagacgcgtgaaccttttcagccacagtgccccgattccatgttcttatgt
taccgcatcagatgggataacgatgaagttgaccgccttagtccgtgggatttggagaag
atcgatttagagaggagacctactagtgctggcaccggtgttccagtgatacctgccgag
atcgccatgacactgtatcagccgcgggccgaagattggcccccaggtggtgatcgagac
tcagagtgcgatcgcatcgccgccggaatcagccaagttatgggcctagctatagccgaa
ccttttgctgcgcccgtcgaccttaatttgtacccatcttacgcttacgtcgttgaatat
ccaatggatctctcaactataaaagctaggctggaaaatcgcttctatcgccgtgtgact
gccgtccaatacgacgtgcgttacgtcttcaccaacgcttgcaaattcaatgaacccaag
tcggatattgtgcgatcggcttccatcatttctgatttgtgtctggaaattattcgcaat
cgcgattccgtggacgccacagctttgtatcatcaactcgtggagaagtataaaattcgc
gacgaaagtgctaatgaaaacgctactgccggcccaagtactagcaaaggagctgacaca
aaaagaaatgaatctgcgccgaatactcccaatacccgttcaaagagtcgtcgtaattct
gaacacacgaactcggattcggataatgattcgtcaaaagccaaaggcaaaaatggaact
aatagtgctaaatcaaaggaaaagaaaattaatactcgaatagctaaagcagctgccctg
agctggaagcagcagtgtaaggatttactagaaatgttgcataattccgaagatggagga
cctttccgcgaacctgtcaacatcctggaagtacctgattacctccaggttattgatcat
ccgatggatttgctgacagtacgcgaacagcttcaggtcagcaattatgccacaccgatg
gatttcacaaaggacgtccgccttatctttgaaaattccaaaaacttcaacaccaataag
aaatccagaatttatgcaatgacggttcggttatcggctgtctttgaagagcacatacga
agtattcttgcttcttataaatatcgtaaaaatacgggaaggaaatccaagagtccgcat
tcaaaaggtaccaaatcaaggaagggcaaatctttggcccctcctaacgcggctaggggc
attaaactagagaatggcgtcgaactacccagagaaaacattaaaatcgtccttagtcgc
gtgaacaaagggcagattgtcgtccagccaagctcttccactcaaacaactgatgctggt
gttggatcggtccgtagacgcatcctcgaagaagatgaacctggtgcgtcgaatcattcc
gtccttcccaatggaaattcggttcacacaagtgaagatatcgatgtgaaacctggtcca
agtggcttatctgcttccgcattggcacctacaactaacggtttaggtaagcggggaccg
aagcgaaggatcgtcagtgatgatgactatgaggaggaggaggatgacgacgacgaccat
gaagcaactctactcattcccaaagaggaagagagtttagggtctcctgatcaaaataaa
tctcaagaagatctgactaaaggaaaagctttgaaaaaacgagacgcttctgctgttttg
agaagcggtcaagaagaaagcagctctgaagatgaaaaaccaatcagccaaagaagacgg
ttgccaatggccaaagtgcctgttccagttgttaaagaagaagacgtacgtccatcaagt
agctcatccaatggcagctcggtcagcaaaggcaatagttctaatagtggaagtttgtgc
gaagatgggagctctttacgacgctcaggtcgggcccgtcgtaaacctaaaagacctttt
gattcagagcccagtgaaaatgaagaaaaatccccagcattagccgaaggtcgaaaacat
cagccgagggccgttcgcactcgaaatggtggaaaacgcaccgttcgttaccgcgaggac
tcggaggacgaagctaaaaagagaaatagccgccaaacaggtgagtcgaaaggaaatagc
agccgattggccagaaaagtaaatagtgatgacgacgatgatgatgatgaccacgaaaac
gaggatcccagagtaaaaaaacaagaaaacggaagtatcaaaagatgtagccgacagtct
gctcaagaagcatccaagagattgcgtacggacttggccacgtcgtccgacgatgacgat
gtaccagccatacctacatacgctgtgagcagccgaggaaggctccgcaaaattatcaac
cactcacatcaggattcgtattctgaatga
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integrated database retrieval system
