Daphnia magna (water flea): 116936405
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Entry
116936405 CDS
T07514
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116936405
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116936405
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116936405
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116936405
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
116936405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
116936405
NCBI-ProteinID:
XP_032799446
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All DBs
Position
LG1:complement(2181390..2184929)
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AA seq
737 aa
AA seq
DB search
MAAFEEMGVLPQIAKRLEELDWMLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
IQIVWETIKDIQSGKAASRSGNTNAAIEPQDKWILSAYDRTPAMAINTEGTLCQSRDAAW
AGGRATKGLLNKGKYYYEATVSDEGLCRVGWSLNEASLDLGTDRYGYGFGGTGKKSNNRQ
FDDYGTAYGLNDVIGCALDLDNRVISFFKNGVDLGKAFDINPEFRNKALFPAVALKNAEI
EFNFGHKPFKFGTPKNFIPVCQAGSDCASLNSNSGVAVPAQVKLKANAPQAVIIEPSREL
AEQTYKEINSFKKYLDSPDIRTMLVAGGIAIKEQLSDLQKGVDIVVGTPGRLEELTKSEN
LLLTHCRFLVLDEADGLLQQGHGELINRLHSRAPKITNDGKRLQMIVCSATLHSFDVKKM
ADRLMHFPTWIDLKGEDSVPDTVHHVVVTVDPRTDMSWHNLPKRIPTDGVHANDRLVPTS
ATPEMLSEAVKLLKGEYCVRAITEHNMDQAIIFCRTKVDCDNLETYLNSIDKNKFSCVCL
HGDRKPQERRDNLEAFKQKKVKFLICTDVAARGLDIGGLPFMINITLPDEKSNYVHRIGR
VGRAERMGLAISFVSNVPEKVWFHGEWCSSRGKGCTNSKLTTQGGCCIWYDEQQCLADVE
EHLGITISQAGTDIKVPQDEFDGKVVYGQKKKATTSAYQSHVAQMAGAVQELAVQEMKAQ
LLFHSFANNAKKIFGSA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttttgaagaaatgggggttttgccgcaaatcgcgaaacgtctagaagaacta
gactggatgttgcccacagatgtccaggctgaagctgtaccattgatccttggtggaggg
gatgttctaatggcagcagaaactggcagtggaaaaacaggggcattttgcttaccaatc
atccagattgtgtgggaaactattaaagatatccaaagtggaaaagcagcatctagatct
ggcaatactaatgccgccatagaacctcaagataaatggattttaagtgcatatgacaga
accccagctatggccataaacactgaagggacattgtgtcaatcaagagatgcagcctgg
gctggtggaagagcaacaaaagggttgcttaacaaagggaagtattactatgaagccaca
gtttcagatgagggtctatgcagagtaggttggtctttgaatgaggcatccttggatctt
ggtacagatcgctacggatatggctttggtggcacgggcaaaaaatctaacaaccgacag
ttcgatgattatggcactgcctatgggctgaacgacgttataggctgtgcactcgacctt
gacaacagagtcatctcgttctttaagaacggtgttgatttaggaaaagcttttgacata
aatccggagttcagaaataaagctctcttcccagctgtggcactcaagaatgctgaaata
gaattcaactttggccataaacctttcaaatttggaacacctaaaaatttcataccagtt
tgccaagcaggaagtgattgtgcgtctttaaactcgaattctggggttgctgtgcctgct
caggttaaactaaaggcaaatgctccacaggccgtcatcattgagccttcccgcgagctc
gctgaacagacttacaaagagataaacagtttcaaaaaatatttggattctcctgatata
cgaacgatgcttgtggcagggggcattgcaatcaaagagcagcttagcgatcttcagaaa
ggagttgatatcgttgtgggcacaccgggccgactggaagagctaaccaagagtgaaaat
cttctattgacccattgccgcttccttgttttggacgaagcggatggattgttgcaacaa
ggccatggagagttgatcaatcgcttgcattctcgagctccgaaaataaccaatgacggg
aaacgcttgcagatgatcgtatgctccgccacccttcattcgttcgatgtgaaaaaaatg
gccgatcgcctgatgcattttccaacatggatcgatttgaaaggtgaagactcagtacca
gacacagtgcaccatgtcgtcgttacggtagatcctcgtactgacatgtcgtggcataat
ttaccgaagcgaataccaaccgatggggtgcacgcaaatgaccgcttagttcctacatcc
gccacacctgagatgttgtctgaggcagtaaaactactaaaaggagaatattgcgtcagg
gccataactgaacataacatggaccaagcaatcatcttctgtcgcacaaaagtcgactgt
gataatcttgaaacctacttgaattccatcgataagaataagttctcatgcgtatgtctc
catggtgaccgaaagccacaagagcgtcgcgacaatctagaagctttcaagcagaaaaaa
gtaaagtttctcatctgtactgacgttgctgcgaggggtttggacataggcggtttacct
ttcatgattaacatcacattgccggatgagaaatcgaactatgtccatcgcattggtcga
gttggtagagcagaacgaatgggattggccatttcttttgtatctaatgttcctgaaaag
gtatggtttcacggtgagtggtgttcgtcgcgcggcaaagggtgcactaattcaaagttg
accacccaaggtggatgctgcatctggtatgatgagcaacagtgtttagccgatgtggag
gagcacttgggcataacgatatcgcaagctggcacggacattaaagtcccacaagacgaa
ttcgatggtaaagtggtgtatggacagaagaaaaaagctacaacctcggcttaccagagc
cacgtggctcaaatggcaggggctgttcaggaactagcagtccaagaaatgaaggctcaa
ctgcttttccactcctttgctaataatgctaagaagatttttgggtctgcctga
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