KEGG   Daphnia magna (water flea): 116936406
Entry
116936406         CDS       T07514                                 
Name
(RefSeq) splicing factor 1
  KO
K13095  splicing factor 1
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116936406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dmk03041]
    116936406
Spliceosome [BR:dmk03041]
 Complex A
  Other components
   Complex A specific factors
    116936406
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP zf-CCHC KH_1 KH_12 DUF7573 DnaJ_CXXCXGXG MotA_N Zn_ribbon_LapB
Other DBs
NCBI-GeneID: 116936406
NCBI-ProteinID: XP_032799447
UniProt: A0A0N8A5T9
LinkDB
Position
LG1:2317549..2320739
AA seq 638 aa
MPSNAHSTGANTTPLGRVNPALTGGRRQATSSLLNPNYLNSDDEGSGSHGSYEPKYETRY
ESKFDQPSTTPSYGYATSSSTSASAGTWKRGLEDSNNSDDNSLGGEKKKKRRSRWGGDEK
EKTFIPGMPTVLPANLTKDQEEAYLVQFKIEEITRKLRTGDLGIAPNPEERSPSPEPIYG
TDGKRLNTREYRMRRKLEEERHSMITKMISLNADFKPPVDYKPPMTRVSDKVMIPQEEHP
EINFVGLLIGPRGNTLKSMEKDTGAKIIIRGKGSVKEGKVGKPLPGEDEPLHAYVTANSM
EAIKKAVDRIKKIIKEAVEVPEDQNDLRKMQLRELAMLNGTFREGEFGPRCSNCGATTHK
AWQCPDKPNVTNTVICNNCGGTGHIARDCRTPRNSGSTDGAPGNKIDEEYMSLMAELGEG
PPPKSEGSGSGTRQSYHGSSGLFDRQQGQPRAITAGPPMSGRGGVPPRGPGPNQPATNQW
GPPQNYGPQAWGTPMGGGWMGHSGMSSVPPPPGTEGASSTSQQQQQQQSSMQPWMGGPPQ
WGGWHAQGPPPPPGVAPPPVPGTSPVAPVPPPPRGPPPVPGVPPPGYYSWGQQPQQSSYG
TYGVPPPPPGQSQQQPPPLPPGSDMSTMMGIPPPPPPQ
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgcctagtaacgctcattcgacgggtgccaatactacacctctgggtagggtaaatcca
gctctgaccggtggacgtcggcaagcaacttcttcccttctaaacccgaactatcttaat
tcggacgatgaaggctcaggctctcacggaagctacgagccaaagtatgaaacaaggtac
gaatcgaaattcgatcaaccgtcaacgactcccagctacggctatgcgacatcttcatct
acatctgccagtgctggtacatggaaaagaggtctggaggacagcaataactcagatgac
aattcacttggtggagaaaaaaagaagaaaagacgttcacgctggggtggagatgaaaaa
gagaaaactttcattcctggcatgccaactgttttaccagcaaatttaaccaaggatcag
gaggaggcatatctagtccaattcaagattgaggagataacacggaaactgaggactggt
gatttaggcattgcccccaatccagaagaaagatcgccctccccggaaccaatttacggg
acggatggcaaaaggttgaatacgcgagaataccggatgcgccgtaagctagaagaggag
cgacactcgatgataaccaagatgatttctttaaatgctgactttaaaccccctgtagac
tacaaaccccctatgacgcgcgtctctgataaagtcatgattccgcaagaagagcatcca
gaaatcaatttcgttggtctgctgattggcccacgtggaaacactttgaaatctatggaa
aaggatactggcgcaaaaatcataattcgaggtaaaggttcagtcaaggaaggtaaggtg
ggtaagcctttgccgggcgaagatgaaccactacatgcctacgtaacagcaaatagtatg
gaagccataaaaaaggcagtcgaccgcattaaaaagatcattaaagaagctgttgaagta
ccagaggatcaaaatgatttacgaaaaatgcagctgagagaattggctatgctgaatggc
acgtttcgtgaaggcgagttcggtccacgttgctcaaactgcggcgctaccactcacaaa
gcctggcaatgtcctgacaaacctaacgtcactaataccgttatctgcaacaactgtggg
ggtactggtcatatcgctcgcgattgccgaacgccacgtaattctggaagtaccgatgga
gcacctggaaacaaaatcgacgaagagtatatgtctttaatggctgaattgggagaaggt
cctccacctaagagtgagggatcgggaagtggcactcgtcaaagctatcatggaagttcg
ggactatttgatcggcaacagggacaacctagagctattactgcaggtccaccaatgagc
ggccgtggtggtgtacccccacgcggcccagggccaaatcagcccgctaccaatcaatgg
ggtcccccacaaaactatggtccgcaagcttggggcactcccatgggcgggggatggatg
ggtcacagtggcatgtcatcggttccgcctcctcctggtactgaaggagcctcttccact
tcacagcagcaacaacaacaacaatccagtatgcagccatggatgggtggaccacctcag
tggggaggttggcacgcccaaggtccgcctccacctccaggagtggcaccaccacctgtg
ccaggtacgtctcctgttgccccagttcctccgccgccaagagggcctcctcctgttcct
ggtgttcccccgccagggtattatagctggggacagcaacctcagcagtcctcatacgga
acttacggagtcccaccgcctccaccaggtcagtcccagcagcagcccccacctctccct
cccggtagtgatatgtcaactatgatgggaataccaccaccaccaccccctcagtag

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