Daphnia magna (water flea): 116936406
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Entry
116936406 CDS
T07514
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116936406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116936406
Spliceosome [BR:
dmk03041
]
Complex A
Other components
Complex A specific factors
116936406
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
KH_12
DUF7573
DnaJ_CXXCXGXG
MotA_N
Zn_ribbon_LapB
Motif
Other DBs
NCBI-GeneID:
116936406
NCBI-ProteinID:
XP_032799447
UniProt:
A0A0N8A5T9
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Position
LG1:2317549..2320739
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AA seq
638 aa
AA seq
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MPSNAHSTGANTTPLGRVNPALTGGRRQATSSLLNPNYLNSDDEGSGSHGSYEPKYETRY
ESKFDQPSTTPSYGYATSSSTSASAGTWKRGLEDSNNSDDNSLGGEKKKKRRSRWGGDEK
EKTFIPGMPTVLPANLTKDQEEAYLVQFKIEEITRKLRTGDLGIAPNPEERSPSPEPIYG
TDGKRLNTREYRMRRKLEEERHSMITKMISLNADFKPPVDYKPPMTRVSDKVMIPQEEHP
EINFVGLLIGPRGNTLKSMEKDTGAKIIIRGKGSVKEGKVGKPLPGEDEPLHAYVTANSM
EAIKKAVDRIKKIIKEAVEVPEDQNDLRKMQLRELAMLNGTFREGEFGPRCSNCGATTHK
AWQCPDKPNVTNTVICNNCGGTGHIARDCRTPRNSGSTDGAPGNKIDEEYMSLMAELGEG
PPPKSEGSGSGTRQSYHGSSGLFDRQQGQPRAITAGPPMSGRGGVPPRGPGPNQPATNQW
GPPQNYGPQAWGTPMGGGWMGHSGMSSVPPPPGTEGASSTSQQQQQQQSSMQPWMGGPPQ
WGGWHAQGPPPPPGVAPPPVPGTSPVAPVPPPPRGPPPVPGVPPPGYYSWGQQPQQSSYG
TYGVPPPPPGQSQQQPPPLPPGSDMSTMMGIPPPPPPQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtaacgctcattcgacgggtgccaatactacacctctgggtagggtaaatcca
gctctgaccggtggacgtcggcaagcaacttcttcccttctaaacccgaactatcttaat
tcggacgatgaaggctcaggctctcacggaagctacgagccaaagtatgaaacaaggtac
gaatcgaaattcgatcaaccgtcaacgactcccagctacggctatgcgacatcttcatct
acatctgccagtgctggtacatggaaaagaggtctggaggacagcaataactcagatgac
aattcacttggtggagaaaaaaagaagaaaagacgttcacgctggggtggagatgaaaaa
gagaaaactttcattcctggcatgccaactgttttaccagcaaatttaaccaaggatcag
gaggaggcatatctagtccaattcaagattgaggagataacacggaaactgaggactggt
gatttaggcattgcccccaatccagaagaaagatcgccctccccggaaccaatttacggg
acggatggcaaaaggttgaatacgcgagaataccggatgcgccgtaagctagaagaggag
cgacactcgatgataaccaagatgatttctttaaatgctgactttaaaccccctgtagac
tacaaaccccctatgacgcgcgtctctgataaagtcatgattccgcaagaagagcatcca
gaaatcaatttcgttggtctgctgattggcccacgtggaaacactttgaaatctatggaa
aaggatactggcgcaaaaatcataattcgaggtaaaggttcagtcaaggaaggtaaggtg
ggtaagcctttgccgggcgaagatgaaccactacatgcctacgtaacagcaaatagtatg
gaagccataaaaaaggcagtcgaccgcattaaaaagatcattaaagaagctgttgaagta
ccagaggatcaaaatgatttacgaaaaatgcagctgagagaattggctatgctgaatggc
acgtttcgtgaaggcgagttcggtccacgttgctcaaactgcggcgctaccactcacaaa
gcctggcaatgtcctgacaaacctaacgtcactaataccgttatctgcaacaactgtggg
ggtactggtcatatcgctcgcgattgccgaacgccacgtaattctggaagtaccgatgga
gcacctggaaacaaaatcgacgaagagtatatgtctttaatggctgaattgggagaaggt
cctccacctaagagtgagggatcgggaagtggcactcgtcaaagctatcatggaagttcg
ggactatttgatcggcaacagggacaacctagagctattactgcaggtccaccaatgagc
ggccgtggtggtgtacccccacgcggcccagggccaaatcagcccgctaccaatcaatgg
ggtcccccacaaaactatggtccgcaagcttggggcactcccatgggcgggggatggatg
ggtcacagtggcatgtcatcggttccgcctcctcctggtactgaaggagcctcttccact
tcacagcagcaacaacaacaacaatccagtatgcagccatggatgggtggaccacctcag
tggggaggttggcacgcccaaggtccgcctccacctccaggagtggcaccaccacctgtg
ccaggtacgtctcctgttgccccagttcctccgccgccaagagggcctcctcctgttcct
ggtgttcccccgccagggtattatagctggggacagcaacctcagcagtcctcatacgga
acttacggagtcccaccgcctccaccaggtcagtcccagcagcagcccccacctctccct
cccggtagtgatatgtcaactatgatgggaataccaccaccaccaccccctcagtag
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