Daphnia magna (water flea): 116936610
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Entry
116936610 CDS
T07514
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X2
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00900
Terpenoid backbone biosynthesis
dmk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116936610
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dmk01006
]
116936610
Enzymes [BR:
dmk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116936610
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116936610
Prenyltransferases [BR:
dmk01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116936610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DNApol3-delta_C
Motif
Other DBs
NCBI-GeneID:
116936610
NCBI-ProteinID:
XP_032799696
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All DBs
Position
LG1:complement(13029286..13031522)
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AA seq
347 aa
AA seq
DB search
MASSCKIKDQFHEFFPEMLRCLKNSPPLHKLPSMQEWVEKIVEYNLKGGKMNRGMAVVES
FMILKNHQVSEEEKNTAIALGWAVEMLQAFFLVADDIMDGSLTRRMKPCWYRTNNLGVKA
FNDSILLESLIYQIVSSYCKNQHYYLPVLELFHDVTMRTSLGQAMDLHSAPNPNEAPDLS
KFTVETYDAIVKYKTAYYSFYLPVAVAMRLAGIQDNDLLKRAEDILLPMGRFFQVQDDYL
DCFGDPEITGKIGTDIEDGKCSWLIVTALPMCDSAQRQLIEAHYGLKNTESVNLVKSLYQ
QFDIPKLYTEYEERSYKELTQMIEGIKHQLPTSIFQGFMEKIYKRLN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcatgcaagataaaggaccagtttcatgaattcttccccgaaatgttaaga
tgtttaaagaattcaccaccactgcacaagttgccatcaatgcaagaatgggttgaaaag
attgttgaatacaacctaaaaggaggcaaaatgaaccgtggcatggctgttgtggaaagc
ttcatgattttaaaaaatcaccaagtatcagaagaagagaagaacacagccatagcactt
ggctgggctgttgagatgttgcaggcattcttccttgttgcagatgacattatggatggt
tctctcacgagaagaatgaagccgtgctggtatcgcacgaacaatcttggagttaaggct
ttcaatgactccatattgttggaaagcttgatttatcaaatagtctcatcttattgtaaa
aatcagcattattaccttccagtgctggaactgttccatgatgttaccatgaggacctcg
ctgggacaagcaatggatttacactctgcaccaaatccgaatgaagcccctgacctaagc
aaatttacagtggaaacctacgatgctatcgtgaaatacaaaacagcatattattcgttc
taccttccagtggctgtcgcaatgcgtttggcgggaatacaggataacgatcttttgaag
cgggcggaagatattttgttgcccatggggcgtttttttcaagtccaagacgattactta
gactgttttggagatcctgagataacaggtaaaattggcacagacattgaagatgggaag
tgctcctggctaatcgtaacagccctgccgatgtgtgattcggctcagcgacagttaatt
gaagcacattatggtttgaaaaacactgaatctgtgaacctcgtgaagtcgttatatcaa
cagttcgacatccctaaactgtatactgaatatgaagagcgcagttacaaggagctaaca
caaatgatagaaggaattaaacatcaactaccaacttccatattccaagggtttatggag
aagatttacaagcgattgaattga
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