Daphnia magna (water flea): 116936649
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Entry
116936649 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03430
Mismatch repair
dmk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116936649
03460 Fanconi anemia pathway
116936649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116936649
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116936649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
HTH_Tnp_IS630
Motif
Other DBs
NCBI-GeneID:
116936649
NCBI-ProteinID:
XP_032799755
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Position
LG1:complement(16626062..16629047)
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AA seq
736 aa
AA seq
DB search
MDKPNKRPKNILKLEETVVNRIAAGEIIQRPANALKELLENCLDAGSTSIQVTVKDGGLK
LLKIQDNGSGINKEDFPIVCERFTTSKLQKFEDLNAIGTFGFRGEALASISHVAHLTIIT
KTSEMQCAYKCSYHDGKLIGAPKPCAGTQGTQIVVEDLFYNVPTRKNSLKSPSEEHNRII
EVVTRFAVHNASVGFSLKKLNDNGSDVRTSPNSTQEDNIRILYGHVVAKDLIKLQVEDPG
LKVKVNGLISNVDYSGAKFTILLFINHRLVESTPLKRALDSVYAIYLAKGKHPFVYLSME
IAPNCVDVNVHPTKHEVHFLNEDAIIHKIQSSADMLLKAASTSRSFAVQTVIPPISFLDK
QQSKVAGAKVYDKQLVRTDSRDQKIDKFLSTTMESMPPSSSNQSHNFINQTSMESSEEPV
AAVFQLKETEKRIPSEAERAIQGVPDCSDSTMRHRSSVAQGIVERRQFELTSLTQLREDV
KKNTDQVLRDTFKDSIFVGCVSEKHCLIQYGTRLYIFHMERVAEEFFYQRFLDEFGNCGV
ICLSDPPPLYNLALMALDQEENEWRPDDGPKDHLANLASQLLFSKSEMLDDYFSLQINEK
RHLVAIPLLLVDYIPDLTQLPSFVLRLASDVEWNVEKDCFDTICRVMARFYRKPNNHEVR
FSIGYCSLKPFSXQKVFVNTLXVLNVGSDKNWKWTVEHVLYPAIKASLLPPKAWINDGTI
LQIADLPDLYKVFERC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccaaacaaaagacctaagaacatattaaagttggaagaaacagttgtcaac
agaattgcggccggggaaatcattcaaaggccagctaatgctcttaaagaactgttagag
aattgtctggatgctggatcaacatccattcaagtgacggtgaaagacggtggtttaaag
cttttgaaaatccaggacaatgggagtggaatcaataaagaagatttcccaatcgtatgt
gaacgtttcactactagtaaattgcaaaaatttgaagatttgaatgccatcggtactttt
ggatttcgtggagaagctctggcatccataagccatgttgcacatttgaccatcataaca
aaaactagtgagatgcaatgtgcctacaaatgttcatatcatgatggtaagctgattgga
gcaccaaaaccatgtgcagggacacagggtacacaaatagtggtagaagaccttttttac
aatgttcctactagaaagaattctctgaaatctccatcagaagagcataacagaattata
gaagttgtcacacgatttgctgtgcacaatgcttcagttggatttagcctaaagaaatta
aatgataatgggtcagatgtgaggacatctccaaattcaacacaagaagataatatcaga
attctctatggacatgttgtggccaaagatttaatcaaacttcaagtagaagaccctggt
cttaaagttaaagtgaacgggttgatatccaatgttgactattctggggcaaagttcacc
atactcttgtttataaaccatcgccttgtggaatctacgccattgaagagagcgctagat
agcgtttacgcaatttacctcgctaaaggaaaacatcctttcgtttatttgagcatggaa
attgctcccaattgcgtcgacgttaatgttcatccgaccaagcatgaggtgcatttcctc
aacgaggatgccataatacataagattcagtcgtcagcagatatgttgttgaaggctgct
agtacatcaagaagttttgctgtacagactgtcattccgccgattagtttccttgacaaa
cagcagagtaaagtagccggtgcaaaagtttacgacaagcaacttgttcgaaccgacagt
cgtgatcagaaaatcgataaatttctctctacaactatggaatcaatgccgccgtcgtca
tcaaatcaaagtcataattttatcaatcaaacttctatggagtcctccgaggagcctgtc
gccgccgttttccagctgaaagaaactgaaaaacgtataccttcggaagcggaaagagca
attcaaggagttccagattgcagcgatagtacaatgagacatcgcagttcagttgcacaa
ggaatcgttgaaagacgtcagtttgaacttacaagtcttacgcagttgcgtgaagatgtc
aagaaaaataccgatcaagtgttgcgtgatactttcaaagattcaatattcgtcggttgc
gtgagtgagaagcactgcctcattcagtatggaacgcgtctctacatatttcacatggaa
agagttgcggaggaattcttttatcaaagatttcttgatgaatttggcaattgcggtgtt
atttgcctatcggatcctcctcccttgtacaatcttgctctgatggcgttggaccaggaa
gagaatgaatggcgtccagatgacgggcctaaggaccacctggcaaatctagcaagtcag
cttctgttttccaaatcggagatgctagatgattattttagtctgcaaattaacgaaaaa
cgacatcttgttgcaataccattacttctggtggattatattccggaccttactcaactt
ccatcttttgttttgcgtctggcgtcggatgttgagtggaacgtggaaaaagattgcttt
gataccatctgtcgagtcatggctcgattctaccgaaaacccaacaaccatgaagtaaga
ttttctataggttattgcagcctcaagccgttttcttaacaaaaggttttcgtcaacaca
ctctaggtcctcaacgttggttctgataaaaactggaagtggacggtggagcatgttctc
tatcctgccataaaggcttcattacttcctcccaaagcatggataaatgacggcaccatc
ttacagattgccgacttacctgatctctataaagtgtttgagcgatgctga
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